PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733625.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 231aa MW: 25695.2 Da PI: 8.9264

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.9e-19	72	126	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L rqV vWFqNrRa+ k XP_022733625.1 72 RKKLRLTKEQSRLLEESFRQNNTLNPKQKEALALQLKLRPRQVEVWFQNRRARSK 126 78889************************************************98 PP
2	HD-ZIP_I/II	117.7	6.4e-38	72	160	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+ XP_022733625.1 72 RKKLRLTKEQSRLLEESFRQNNTLNPKQKEALALQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 160 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MAVLPTCSSN LELTISVPGF SFSPSIPSSG HERCSTVRDL DINQVPSGGA EDEWITASME 60 VEEESWNGAP PRKKLRLTKE QSRLLEESFR QNNTLNPKQK EALALQLKLR PRQVEVWFQN 120 RRARSKLKQT EMECEYLKRW FGSLTEQNRR LQREVEELRA MKVGPPTVIS PHSCEPLPAS 180 TLTMCPRCER VATTAHDKGP TKVTAATTTA TALSSKVGTS ALQSRPSSAA C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-64	HD-ZIP family protein