PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733640.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 753aa    MW: 82294.3 Da    PI: 5.8887
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.91e-1991146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_022733640.1  91 KKRYHRHTQHQIQEMEAFFKECPHPDDKRRKELGRELGLEPLQVKFWFQNKRTQMK 146
                     688999***********************************************999 PP
2START2213.8e-692744941206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W +s     +++n++e++ +f+++ +      + ea+r+++vv+m++ +lve+l+d+  qW++ +     ka+tl
  XP_022733640.1 274 ELAVAAMEELVRMAQMGEPLWITSLdgtnSMLNEEEYIGTFPRGIGpkptgVKCEASRETAVVIMNHINLVEILMDVH-QWSTVFSgivsKASTL 367
                     57899**************************************999****99**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     + +s+g      galqlm+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d+ ++ p+    vR++++pSg+li++++ng+s+vtwvehv
  XP_022733640.1 368 DILSTGvagnynGALQLMTAEFQVPSPLVPtRESYYVRYCKQHAEGTWAVVDVSLDNLRSSPT----VRCRRRPSGCLIQEMPNGYSRVTWVEHV 458
                     ************************************************************996....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+ga++wvatl+rqce+
  XP_022733640.1 459 EVDDRGVHNLYKQLVSSGHAFGARRWVATLDRQCER 494
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 753 aa     Download sequence    
MPAGVMIPAR NMPSMISGNG NVTGFGTSSG LILGQPNSMM EGQLHPLEMT QNTSESEIAR  60
MRDEEFDSTT KSGSENNEGA SGNDQDPRPK KKRYHRHTQH QIQEMEAFFK ECPHPDDKRR  120
KELGRELGLE PLQVKFWFQN KRTQMKTQHE RQDNTQLRTE NEKLRLDNMR YREALSTSSC  180
PNCGGPTAVG QMSFDEHHLR LENARLREEI DRISAIAAKY VGKPMLNYPL LSSPMPPRPL  240
DFGAQPGTGE MYGAGELLRS IGAPTEADKP MIIELAVAAM EELVRMAQMG EPLWITSLDG  300
TNSMLNEEEY IGTFPRGIGP KPTGVKCEAS RETAVVIMNH INLVEILMDV HQWSTVFSGI  360
VSKASTLDIL STGVAGNYNG ALQLMTAEFQ VPSPLVPTRE SYYVRYCKQH AEGTWAVVDV  420
SLDNLRSSPT VRCRRRPSGC LIQEMPNGYS RVTWVEHVEV DDRGVHNLYK QLVSSGHAFG  480
ARRWVATLDR QCERLASVMA TNIPTGDVGV ITNQDGRKSM LKLAERMVIS FCAGVSASTA  540
HTWTTLSGTG ADDVRVMTRK SVDDPGRPPG IVLSAATSFW LPVSPKRVFD FLRDENSRSE  600
WDILSNGGVV QEMAHIANGR DTGNCVSLLR VNSANSSQSN MLILQESCTD PTASFVIYAP  660
VDIVAMNVVL NGGDPDYVAL LPSGFAILPD GTTATAGGIA DAGSGGSLLT VAFQILVDSV  720
PTAKLSLGSV ETVNNLIACT VERIKASLSC ENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein