PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733642.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 721aa    MW: 79254.7 Da    PI: 5.7709
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.99.5e-2059114156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_022733642.1  59 KKRYHRHTQHQIQEMEAFFKECPHPDDKRRKELGRELGLEPLQVKFWFQNKRTQMK 114
                     688999***********************************************999 PP
2START221.13.5e-692424621206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W +s     +++n++e++ +f+++ +      + ea+r+++vv+m++ +lve+l+d+  qW++ +     ka+tl
  XP_022733642.1 242 ELAVAAMEELVRMAQMGEPLWITSLdgtnSMLNEEEYIGTFPRGIGpkptgVKCEASRETAVVIMNHINLVEILMDVH-QWSTVFSgivsKASTL 335
                     57899**************************************999****99**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     + +s+g      galqlm+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d+ ++ p+    vR++++pSg+li++++ng+s+vtwvehv
  XP_022733642.1 336 DILSTGvagnynGALQLMTAEFQVPSPLVPtRESYYVRYCKQHAEGTWAVVDVSLDNLRSSPT----VRCRRRPSGCLIQEMPNGYSRVTWVEHV 426
                     ************************************************************996....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+ga++wvatl+rqce+
  XP_022733642.1 427 EVDDRGVHNLYKQLVSSGHAFGARRWVATLDRQCER 462
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MFQPNSMMEG QLHPLEMTQN TSESEIARMR DEEFDSTTKS GSENNEGASG NDQDPRPKKK  60
RYHRHTQHQI QEMEAFFKEC PHPDDKRRKE LGRELGLEPL QVKFWFQNKR TQMKTQHERQ  120
DNTQLRTENE KLRLDNMRYR EALSTSSCPN CGGPTAVGQM SFDEHHLRLE NARLREEIDR  180
ISAIAAKYVG KPMLNYPLLS SPMPPRPLDF GAQPGTGEMY GAGELLRSIG APTEADKPMI  240
IELAVAAMEE LVRMAQMGEP LWITSLDGTN SMLNEEEYIG TFPRGIGPKP TGVKCEASRE  300
TAVVIMNHIN LVEILMDVHQ WSTVFSGIVS KASTLDILST GVAGNYNGAL QLMTAEFQVP  360
SPLVPTRESY YVRYCKQHAE GTWAVVDVSL DNLRSSPTVR CRRRPSGCLI QEMPNGYSRV  420
TWVEHVEVDD RGVHNLYKQL VSSGHAFGAR RWVATLDRQC ERLASVMATN IPTGDVGVIT  480
NQDGRKSMLK LAERMVISFC AGVSASTAHT WTTLSGTGAD DVRVMTRKSV DDPGRPPGIV  540
LSAATSFWLP VSPKRVFDFL RDENSRSEWD ILSNGGVVQE MAHIANGRDT GNCVSLLRVN  600
SANSSQSNML ILQESCTDPT ASFVIYAPVD IVAMNVVLNG GDPDYVALLP SGFAILPDGT  660
TATAGGIADA GSGGSLLTVA FQILVDSVPT AKLSLGSVET VNNLIACTVE RIKASLSCEN  720
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein