PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733655.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 363aa MW: 40279.2 Da PI: 9.7798

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.7	1.1e-21	53	144	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gf...erspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e+ aLi+a+r+++ +lrrg+lk+++W++v++ +++r ++ ++++qC++k+e+l+kry+ + +++++ s+ ss++++f++++a XP_022733655.1 53 CWSHDETIALIDAYRDIWYTLRRGNLKATHWQDVADTVARRcPLaspPKTAVQCRHKMEKLRKRYRTEIQRARSMpVSRFSSSWVHFKRMDA 144 8*********************************9944423333489*********************9789**********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MSNPSSPLEP RSNTSPPPPS EPPLALPAPP ASTSTPSATT TVTPNPRRLP PPCWSHDETI 60 ALIDAYRDIW YTLRRGNLKA THWQDVADTV ARRCPLASPP KTAVQCRHKM EKLRKRYRTE 120 IQRARSMPVS RFSSSWVHFK RMDAMEKGPN VKPDYNSNSP DEGNDEDDED DQDQDFYEDG 180 YKNGSVNTRS IQKLYRNGIG NSGGTVSGGG GGSSGGFRIR IPTGVSIAQP GPRFYGKMDE 240 KYAANANSNV NPHPNKGNFG GSGYGTRVLM GFEDTPGKTE PSGRRERDAV KEMVSAIKAL 300 GDGFVRMEQM KMEMAREIES TRMDMEMKRT EMILGSQQRI IEAFAKAVSE RNKKPKRMPS 360 PEP

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MSNPSSPLEP RSNTSPPPPS EPPLALPAPP ASTSTPSATT TVTPNPRRLP PPCWSHDETI  60
ALIDAYRDIW YTLRRGNLKA THWQDVADTV ARRCPLASPP KTAVQCRHKM EKLRKRYRTE  120
IQRARSMPVS RFSSSWVHFK RMDAMEKGPN VKPDYNSNSP DEGNDEDDED DQDQDFYEDG  180
YKNGSVNTRS IQKLYRNGIG NSGGTVSGGG GGSSGGFRIR IPTGVSIAQP GPRFYGKMDE  240
KYAANANSNV NPHPNKGNFG GSGYGTRVLM GFEDTPGKTE PSGRRERDAV KEMVSAIKAL  300
GDGFVRMEQM KMEMAREIES TRMDMEMKRT EMILGSQQRI IEAFAKAVSE RNKKPKRMPS  360
PEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	5e-93	Trihelix family protein