PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733842.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 282aa MW: 32218.3 Da PI: 9.8568

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed llv++++ +G g+W++ +++ g+ R++k+c++rw +yl XP_022733842.1 14 RGPWTPREDTLLVKYIQAHGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	50.4	5e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l XP_022733842.1 67 RGNITLDEEDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7899****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGRAPCCSKV GLHRGPWTPR EDTLLVKYIQ AHGEGHWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TLDEEDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRLLSQG 120 TDPNTHKRLS QPVVQQVKKR KKIRGSSNYK KQNKNKSKEK STVEPAEKPK VHLPKPIRVS 180 TTFSLPRNDS FDQCNTFSTV SSSPVWSEYV NDDANGTGFL AAYNNGDHND FVNGSGFDCR 240 SHVPTSEDDN SLEKLYEEYL QLLNTNNDQE QLDSFAESLL IR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	142	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	5e-71	MYB family protein