PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734240.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 366aa MW: 40645.1 Da PI: 8.2141

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l +++++G g+W++ +++ g+ R++k+c++rw +yl XP_022734240.1 14 RGPWTAEEDKILTACIQKHGLGSWRALPEKAGLQRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	50	6.8e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W+ a++++ +Rt++++k++w+++l XP_022734240.1 67 RGKFSLQEEQTIIQLHALLGNR-WSVMAAHLP-KRTDNEIKNHWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGRSSDCKKG VLKRGPWTAE EDKILTACIQ KHGLGSWRAL PEKAGLQRCG KSCRLRWINY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS VMAAHLPKRT DNEIKNHWNT HLKKRLIKMG 120 IDPMTHKRWT DASRFPSGPG KNASNLSHMA QWESARLEAE ARLVRESKQV VPNPNAIEPK 180 YQVTPTSSQR IRPRCLDVLK AWQGVVAGMF AFSSQDLGSP TSTLSFPDGT VQAPAIGLTG 240 NTYKDGSAGW EETAAELNGQ NSLKCFEKPN QMQELEERII DSNIELNGMT DSSDIDAWFE 300 DSFKVGNCEN APITNIMEGF DSGVLNASMG VEKATEGCSG IIVENSIRWD SVLNLVNSSP 360 YGSPVF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGRSSDCKKG VLKRGPWTAE EDKILTACIQ KHGLGSWRAL PEKAGLQRCG KSCRLRWINY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS VMAAHLPKRT DNEIKNHWNT HLKKRLIKMG  120
IDPMTHKRWT DASRFPSGPG KNASNLSHMA QWESARLEAE ARLVRESKQV VPNPNAIEPK  180
YQVTPTSSQR IRPRCLDVLK AWQGVVAGMF AFSSQDLGSP TSTLSFPDGT VQAPAIGLTG  240
NTYKDGSAGW EETAAELNGQ NSLKCFEKPN QMQELEERII DSNIELNGMT DSSDIDAWFE  300
DSFKVGNCEN APITNIMEGF DSGVLNASMG VEKATEGCSG IIVENSIRWD SVLNLVNSSP  360
YGSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-91	MYB family protein