PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734411.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 331aa MW: 36844.6 Da PI: 7.6013

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00032	170	189	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ XP_022734411.1 170 FSCPVCCKTFNRYNNLQMHM 189 89*****************9 PP
2	zf-C2H2	13.6	0.0002	254	276	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+k F k + ++H +++ XP_022734411.1 254 FMCRKCDKAFAVKGDWRTHEKNC 276 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MTDPCSNLFT GCFNFMPLNP QYTSFSAPTP NHPNPSSQAH TNNIIFNKSS IQCQSTHPPS 60 PPCQEALPLI NYLSPTRQEE NEPSSSSMEE DKNMDKESLF SSTVDDEAVT VALHIGLPSP 120 SSDLRFRLSQ SADVTDNLGG NGSAVSGFPL SKGQYWIPTP TQILVGPTQF SCPVCCKTFN 180 RYNNLQMHMW GHGSQYRKGP DSLRGTQPTA MLRLPCYCCA PGCKHNIDHP RARPLKDFRT 240 LQTHYKRKHG IKPFMCRKCD KAFAVKGDWR THEKNCGKIW YCLCGSDFKH KRSLKDHIKA 300 FGPGHGAVGI DSIDEDDEPG SEFELDVSLP C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-125	C2H2 family protein