PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734559.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 462aa MW: 51366.9 Da PI: 6.8761

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	150	195	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022734559.1 150 RGHWRPAEDTRLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 195 899***************************.*********996 PP
2	Myb_DNA-binding	55	1.8e-17	202	245	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l ++++++G++ W+ Iar ++ gRt++ +k++w+ XP_022734559.1 202 RRAFTEEEEERLMQVHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 245 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MANKCVIYAP DTMNRVSRHS SSAPSSSSSS PGSLMGMVYP DMGSLSLGPN YGIVGSSGSS 60 SQDNYACRGS EMENERASWG FHFMENYKTR SFEENHGSDV VEGKGSDCSD EFGDNSRIIN 120 LIANLNEENP NENAVSGQET DSGQSKLCAR GHWRPAEDTR LRELVALYGP QNWNLIAEKL 180 DGRSGKSCRL RWFNQLDPRI NRRAFTEEEE ERLMQVHRLY GNKWAMIARL FPGRTDNAVK 240 NHWHVIMARN YREQSTAYRR RKLSQSVYVR MEETPNLVCR DAATKAAAPP YCLNIPNRRL 300 GIISQYHFGT FNGADVGVNG GSNVSPHMTS RKEAISSSEV PHNGFCAQQA PFDFFPGFNS 360 NDMMGMFSHT RSWHMPIDEP QISGFYPQQQ QRHPSYKMAM LQSEFPSFPS SQSLTDSTAA 420 TPQVSVSEDS SAVAGSRAAA SSHNNYETVP PPFIDFLGVG AT

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MANKCVIYAP DTMNRVSRHS SSAPSSSSSS PGSLMGMVYP DMGSLSLGPN YGIVGSSGSS  60
SQDNYACRGS EMENERASWG FHFMENYKTR SFEENHGSDV VEGKGSDCSD EFGDNSRIIN  120
LIANLNEENP NENAVSGQET DSGQSKLCAR GHWRPAEDTR LRELVALYGP QNWNLIAEKL  180
DGRSGKSCRL RWFNQLDPRI NRRAFTEEEE ERLMQVHRLY GNKWAMIARL FPGRTDNAVK  240
NHWHVIMARN YREQSTAYRR RKLSQSVYVR MEETPNLVCR DAATKAAAPP YCLNIPNRRL  300
GIISQYHFGT FNGADVGVNG GSNVSPHMTS RKEAISSSEV PHNGFCAQQA PFDFFPGFNS  360
NDMMGMFSHT RSWHMPIDEP QISGFYPQQQ QRHPSYKMAM LQSEFPSFPS SQSLTDSTAA  420
TPQVSVSEDS SAVAGSRAAA SSHNNYETVP PPFIDFLGVG AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-74	MYB family protein