PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734679.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 294aa MW: 33276.1 Da PI: 6.7885

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G+g+W++++ g+ R +k+c++rw +yl XP_022734679.1 15 KGLWSPEEDLKLRNYVLKHGNGCWSSVPINAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E+e ++ ++++lG++ W+ Ia+ ++ gRt++++k++w++yl XP_022734679.1 68 RGMFSPQEEETILTLHHLLGNK-WSQIAQNLP-GRTDNEIKNYWHSYL 113 788*****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGCKSSDMPK AKHRKGLWSP EEDLKLRNYV LKHGNGCWSS VPINAGLQRN GKSCRLRWIN 60 YLRPGLKRGM FSPQEEETIL TLHHLLGNKW SQIAQNLPGR TDNEIKNYWH SYLKKRIAKV 120 EELEAQSRTQ YTTSSSENTE STLSPQNLID QMPSFESFQH LQKSSISSDQ AVPQHFDFCK 180 EPRRSPLPKL LFAEWLSLDQ GGSFANSRNA VASSDGFIHG SSSNFQDPFM NAYLLNEGAF 240 GSDLHDELSN ASVNEMFSSQ FKFETQISGN EFVGSISGND ICSDFNMNND VMYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52260.1	1e-56	MYB family protein