PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022734775.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 747aa    MW: 81905.2 Da    PI: 6.1362
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022734775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2054109156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t+ q++eLe++F+++++p++++r+eL+++lgL  +q+k+WFqNrR+++k
  XP_022734775.1  54 KKKYHRHTPRQIQELESFFKECPHPDEKQRTELSRRLGLASKQIKFWFQNRRTQMK 109
                     79999************************************************999 PP
2START180.87.6e-572554772205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     +a++a++el+k+a+ + p+W k      e +n +e++++f++  +     +++ea r++g+v+     lve+l+d + +W e+++    +a+t++
  XP_022734775.1 255 VALAAMDELIKMAQMDNPLWIKGLdggmETLNLEEYRRTFSSCIGlkpsgYTTEATRETGLVFLRGLALVETLMDAN-RWAEMFPcmisRAATID 348
                     6899********************9*9999**********98888********************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+ssg      +alq+  ae+q+lsplvp R + fvRy++q+ +g+w++vdvS+d +q+  +s+ +  +++lpSg++i++++n++s+vtwveh +
  XP_022734775.1 349 VLSSGmgitrdNALQVVDAEFQVLSPLVPvRQVRFVRYCKQHLDGVWAVVDVSIDARQDAANSQMFPNCRRLPSGCVIQDMANNYSRVTWVEHSE 443
                     ************************************************************999999***************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqce 205
                     ++++ +h ll++l++sg  +ga++wvatlqrqc 
  XP_022734775.1 444 CDDSAVHHLLQPLLSSGFGFGAQRWVATLQRQCD 477
                     *********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MDGHGKMGLI GENFDPGLVV MMKEDGYESR SGSDNFEGAS GDDQDAAADG PPKKKKYHRH  60
TPRQIQELES FFKECPHPDE KQRTELSRRL GLASKQIKFW FQNRRTQMKT RLERHENVIL  120
SQQNDKLRAE NDLLKQAITS PLCNSCGGPA VPGEISYEQH QLRIENARLK DELSRICALT  180
NKYLGRSLLS SASSIPSQGL NSNLELAIGR NGFGGLNNAG NTLPMGFDFG DGAMMPLMKP  240
MANEMPYAKS AFVGVALAAM DELIKMAQMD NPLWIKGLDG GMETLNLEEY RRTFSSCIGL  300
KPSGYTTEAT RETGLVFLRG LALVETLMDA NRWAEMFPCM ISRAATIDVL SSGMGITRDN  360
ALQVVDAEFQ VLSPLVPVRQ VRFVRYCKQH LDGVWAVVDV SIDARQDAAN SQMFPNCRRL  420
PSGCVIQDMA NNYSRVTWVE HSECDDSAVH HLLQPLLSSG FGFGAQRWVA TLQRQCDRMA  480
MLMSPDIPGA DNTGITPAGR KSMLKLAQRM TYNFCAGVCT SSVHKWDKLS VGNVGEDVRV  540
MTRKNINDPG EPHGVVLSAA TSVWMSITQQ RLFDFLRDEQ MRSQWDILSN GGPMQEMVNV  600
AKGQGHGNCV SLLHGSAINA NENNMLILQE TWCDPSGALV VYAPVDVSSM NVVMNGGDSA  660
YVALLPSGFA IFPGISPSYH GGQSNSNEPS VKPDIDGSIN SGCILTVGFQ ILVNSIPTAK  720
LTEESVETVN NLISCTIQKI KAALTET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein