PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734832.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 606aa MW: 67286.4 Da PI: 5.8292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.5	1.1e-13	445	491	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022734832.1 445 NHVEAERQRREKLNQRFCALRAVVPNiS------KMDKASLLGDAIAYINELQ 491 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLMTVNSDE NLQNKLSDLV 60 DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEVTRIL NLRLEDETQQ 120 KMRKRVLQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFLRGEGG PGKCFSSRKH 180 VWISDALKSG LDYCVRSFLT KSAGVQTVVL IPTDVGVVEL GSVRSVPESL ELLQSIRSSF 240 SSNSALLRAK QMAVAIPVVN EKKDENIDFL NLKIAERVEG ISKIFGQDLK NTSHDHSNYR 300 EKLAVRKMED RTTWGAYANG GRLSFSSNQN GIHGLGWSHV HGLIQGSPTE FYGSQNAANN 360 FQDLVNGAGE EFLLENYQSQ KPVQMQIDFS GATSRPSSIT QPLSVESEHS DVEASCKEEK 420 PSAADERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FCALRAVVPN ISKMDKASLL 480 GDAIAYINEL QAKLKVMESE SEKFGSTSRD SAGLDPNPNV ENHNRAPDID VQAAHDEVVV 540 RLSCPLDTHP ASRLIQTFKE AQIDVVESKL VTADDTVFHT FVIKSQGSEQ LTREKLVAAF 600 SPGSNP

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLMTVNSDE NLQNKLSDLV  60
DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEVTRIL NLRLEDETQQ  120
KMRKRVLQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFLRGEGG PGKCFSSRKH  180
VWISDALKSG LDYCVRSFLT KSAGVQTVVL IPTDVGVVEL GSVRSVPESL ELLQSIRSSF  240
SSNSALLRAK QMAVAIPVVN EKKDENIDFL NLKIAERVEG ISKIFGQDLK NTSHDHSNYR  300
EKLAVRKMED RTTWGAYANG GRLSFSSNQN GIHGLGWSHV HGLIQGSPTE FYGSQNAANN  360
FQDLVNGAGE EFLLENYQSQ KPVQMQIDFS GATSRPSSIT QPLSVESEHS DVEASCKEEK  420
PSAADERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FCALRAVVPN ISKMDKASLL  480
GDAIAYINEL QAKLKVMESE SEKFGSTSRD SAGLDPNPNV ENHNRAPDID VQAAHDEVVV  540
RLSCPLDTHP ASRLIQTFKE AQIDVVESKL VTADDTVFHT FVIKSQGSEQ LTREKLVAAF  600
SPGSNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	427	435	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein