PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734833.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 573aa MW: 63880.4 Da PI: 5.9609

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.6	1.1e-13	412	458	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022734833.1 412 NHVEAERQRREKLNQRFCALRAVVPNiS------KMDKASLLGDAIAYINELQ 458 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLMTVNSDE NLQNKLSDLV 60 DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEVTRIL NLRLEDETQQ 120 KMRKRVLQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFLRGEGG PGKCFSSRKH 180 VWISDALKSV RSVPESLELL QSIRSSFSSN SALLRAKQMA VAIPVVNEKK DENIDFLNLK 240 IAERVEGISK IFGQDLKNTS HDHSNYREKL AVRKMEDRTT WGAYANGGRL SFSSNQNGIH 300 GLGWSHVHGL IQGSPTEFYG SQNAANNFQD LVNGAGEEFL LENYQSQKPV QMQIDFSGAT 360 SRPSSITQPL SVESEHSDVE ASCKEEKPSA ADERRPRKRG RKPANGREEP LNHVEAERQR 420 REKLNQRFCA LRAVVPNISK MDKASLLGDA IAYINELQAK LKVMESESEK FGSTSRDSAG 480 LDPNPNVENH NRAPDIDVQA AHDEVVVRLS CPLDTHPASR LIQTFKEAQI DVVESKLVTA 540 DDTVFHTFVI KSQGSEQLTR EKLVAAFSPG SNP

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MKIEVGMGGG AWNDEDKAMV AAVLGTRAFD YLISSSVSNE NLLMTVNSDE NLQNKLSDLV  60
DRPNASNFSW NYAIFWQISR SKSSDWVLGW GDGCCREPKE GEESEVTRIL NLRLEDETQQ  120
KMRKRVLQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFLRGEGG PGKCFSSRKH  180
VWISDALKSV RSVPESLELL QSIRSSFSSN SALLRAKQMA VAIPVVNEKK DENIDFLNLK  240
IAERVEGISK IFGQDLKNTS HDHSNYREKL AVRKMEDRTT WGAYANGGRL SFSSNQNGIH  300
GLGWSHVHGL IQGSPTEFYG SQNAANNFQD LVNGAGEEFL LENYQSQKPV QMQIDFSGAT  360
SRPSSITQPL SVESEHSDVE ASCKEEKPSA ADERRPRKRG RKPANGREEP LNHVEAERQR  420
REKLNQRFCA LRAVVPNISK MDKASLLGDA IAYINELQAK LKVMESESEK FGSTSRDSAG  480
LDPNPNVENH NRAPDIDVQA AHDEVVVRLS CPLDTHPASR LIQTFKEAQI DVVESKLVTA  540
DDTVFHTFVI KSQGSEQLTR EKLVAAFSPG SNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	394	402	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein