PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022734866.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 312aa    MW: 35657.9 Da    PI: 6.4015
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022734866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-172471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd l+ ++++++G g+W+  a++ g++Rt+k+c++rw++yl
   XP_022734866.1 24 RGPWTLEEDTLITHYIARHGEGRWNMLAKYAGLKRTGKSCRLRWLNYL 71
                     89********************************************97 PP
2Myb_DNA-binding54.72.4e-1777120146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022734866.1  77 RGNLTPEEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 120
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MRAAMPPVTK SMSTPVQTDS ELRRGPWTLE EDTLITHYIA RHGEGRWNML AKYAGLKRTG  60
KSCRLRWLNY LKPDIKRGNL TPEEQLLILE LHSKWGNRWS KIAQHLPGRT DNEIKNYWRT  120
RVQKQARQLN IESNSKRFLE AVRCFWMPRL LQKVEQTSSS SSSSLKEMSF RSSDPSQLLD  180
CTDPALSTFS PLPNTITDNS NHSSENSSSI TSQSLYRTDF MNIPEQTEIP EHLISPNVYG  240
HTCVCNNNQI LNESYNNDSS GYDMGGFSLA PMLAVGSYEG FPSELGEGNW IFNEMADNLW  300
NMDDIYDSLG SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.19e-85MYB family protein