PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022734931.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 24927 Da    PI: 10.2393
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022734931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.91.5e-293686151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie  + rqvtfskRrng+lKKA+ELSvLCdaevaviifs++g++ye+ss
  XP_022734931.1 36 KRIEKATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRVYEFSS 86
                    79***********************************************96 PP
2K-box70.84.3e-24109198998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       e+ + +l+ e++++ ++ie L+ +qR+llG++L+s+s++eL ++e+qLe+sl++iR++K +l++eq+e+l+ ke+ l+een +L++k+
  XP_022734931.1 109 EMERYTRQLRLEAENMARKIELLEVSQRKLLGQSLGSCSVEELLEVESQLERSLRNIRARKGHLFKEQMEQLKAKERFLREENAKLSAKV 198
                     66777889999****************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MNIYAYLPLY LGLTRGIFEI FFFLNLEMVR GKIQMKRIEK ATSRQVTFSK RRNGLLKKAY  60
ELSVLCDAEV AVIIFSQKGR VYEFSSSDMQ KTIERYHKYI KEAQTDKPEM ERYTRQLRLE  120
AENMARKIEL LEVSQRKLLG QSLGSCSVEE LLEVESQLER SLRNIRARKG HLFKEQMEQL  180
KAKERFLREE NAKLSAKVIH HSKIFTARHE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.34e-63MIKC_MADS family protein