PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734944.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 237aa MW: 27572.5 Da PI: 7.8869

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.1	5.6e-29	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +rienk+nrqvtfskRrng+ KKA+ELSvLCdaeva+iifss+gkl e+ XP_022734944.1 9 ERIENKINRQVTFSKRRNGLQKKAFELSVLCDAEVALIIFSSRGKLSEFG 58 69**********************************************95 PP
2	K-box	84.6	2.1e-28	76	170	5	99
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s+++ +e+++++l+qe+ +Lk+++e+Lqr qRhllGe+Le+Ls+keL ++e+qL++ l+ R+kK +llle +eel+kke+el++enk+L+ +le XP_022734944.1 76 SQVNIAENETQTLHQEVLRLKAKYESLQRCQRHLLGEELETLSVKELYKIEKQLDRTLSLARQKKVQLLLERMEELRKKERELEDENKQLKCQLE 170 55668999**********************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MGRGKVMLER IENKINRQVT FSKRRNGLQK KAFELSVLCD AEVALIIFSS RGKLSEFGSN 60 TVPQTLEKYW QHRYASQVNI AENETQTLHQ EVLRLKAKYE SLQRCQRHLL GEELETLSVK 120 ELYKIEKQLD RTLSLARQKK VQLLLERMEE LRKKERELED ENKQLKCQLE LEQCFQAAQG 180 LGDPNIEVGN EYNMPPLQAN HAQQEPSMPM GYHQFIPQRV TEDWADGGAN KCTAVWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-55	MIKC_MADS family protein