PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735001.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 560aa MW: 60544.2 Da PI: 6.7921

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.3	2.3e-31	218	275	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+ ++ei+Y+g+H+h+k XP_022735001.1 218 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGLITEIIYKGTHDHPK 275 8**************************************.*************85 PP
2	WRKY	106.3	1.6e-33	381	439	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_022735001.1 381 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 439 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MVMEEQTLAS SSSGAAVTTQ HDLSGLVGSG GALYKMVAPA KLPISRSACI TIPPGLSPSS 60 FLESPVLLSD VKAEPSPTTG SLIKCQAVHA SVASSTYSAT DMCSIAFDER NPSCFEFRPH 120 PRSNMAPADF NHQRSEQSLK IQGQYQTISF NSSASVKKEM AGSSNELSLS VPVHAATSMA 180 SAAAEVDVDE LNQTGNPNSG IQLGQSDHGG GGPSVPSDDG YNWRKYGQKH VKGSEFPRSY 240 YKCTHPNCEV KKLFERSHDG LITEIIYKGT HDHPKPQPSR RCSLGNIMSG QEERSDKVSS 300 MTGRDDKPSS MYGQMAHSIE PNSTADVTSV TANDDNVDEV DDDDPFSKRR KMDGGVDITP 360 VVKPIREPRV VVQTLSEVDI LDDGYRWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER 420 ASHDPKAVIT TYEGKHNHDV PTARTSSHDT AGAVAMSGPS RIRSEENDAV SLDLGVGIRS 480 APENSSNDHQ QLHSELVQSH GGSSFKLVQA TPMTAYYGVL NGGMSQYISR ENPSESRVEI 540 TPLNHSYAFP RSMGKILTGP

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MVMEEQTLAS SSSGAAVTTQ HDLSGLVGSG GALYKMVAPA KLPISRSACI TIPPGLSPSS  60
FLESPVLLSD VKAEPSPTTG SLIKCQAVHA SVASSTYSAT DMCSIAFDER NPSCFEFRPH  120
PRSNMAPADF NHQRSEQSLK IQGQYQTISF NSSASVKKEM AGSSNELSLS VPVHAATSMA  180
SAAAEVDVDE LNQTGNPNSG IQLGQSDHGG GGPSVPSDDG YNWRKYGQKH VKGSEFPRSY  240
YKCTHPNCEV KKLFERSHDG LITEIIYKGT HDHPKPQPSR RCSLGNIMSG QEERSDKVSS  300
MTGRDDKPSS MYGQMAHSIE PNSTADVTSV TANDDNVDEV DDDDPFSKRR KMDGGVDITP  360
VVKPIREPRV VVQTLSEVDI LDDGYRWRKY GQKVVRGNPN PRSYYKCTNA GCPVRKHVER  420
ASHDPKAVIT TYEGKHNHDV PTARTSSHDT AGAVAMSGPS RIRSEENDAV SLDLGVGIRS  480
APENSSNDHQ QLHSELVQSH GGSSFKLVQA TPMTAYYGVL NGGMSQYISR ENPSESRVEI  540
TPLNHSYAFP RSMGKILTGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein