PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735002.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 539aa    MW: 59914 Da    PI: 5.6713
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735002.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS461.16.6e-1411695391374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL  cA+a++++d++ a+ l+++l++++s +g+p+qRl ay++e+L arla+s+s++yk+l+++e +   s+e l+++++++e++P++kf++
  XP_022735002.1 169 LKELLCVCAKAIENNDMNTADCLMTQLRQMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKSLKCKEPA---SAELLSYMHILYEICPYFKFGY 260
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI +a++ e+rvHiiDf+isqG+QW++L++aLa+Rp+gpps+RiTg+++p+s   +   l+ +g+rL+k+Ae+++vpfef++ +a   +d
  XP_022735002.1 261 MSANGAIADAMKDENRVHIIDFQISQGGQWLTLIHALAARPGGPPSIRITGIDDPSSAyaRGGGLQIVGQRLSKLAESCNVPFEFHA-AAIYGTD 354
                     ********************************************************9999999************************.8999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L ++pgEa+aVn+ + lh+++desvs++++rd++L++vkslsPkvv+v+eqea++n+++F+ rfle+l+yy a+f+s++++lpre++eri
  XP_022735002.1 355 VQPENLGIQPGEAIAVNFPMILHHMPDESVSTQNHRDRLLRMVKSLSPKVVTVMEQEANTNTAPFFPRFLETLNYYLAIFESIDVSLPREHKERI 449
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+reivn++aceg er+erhe ++kWr+r+ +aGF+p pls+++++++k+ll+ ++++ y++ee++g l+lgW++rp+v+ +aWr
  XP_022735002.1 450 NVEQHCLAREIVNIIACEGPERVERHEFMGKWRSRFIMAGFTPCPLSSFVNATIKALLQSYYDK-YTLEEKDGVLYLGWMNRPIVTSCAWR 539
                     **************************************************************55.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MQMSLKHKIT SMYVDQPVQE LEPDCWPPNQ SLDLYQSCSD DGSNGVHHSV QNLEQYCTLE  60
SLSGMQNSSS TASFSPNGSP VSQPNYSYPS DLHHYPDNTS GSPVSGSCVT DNEHDLRHMI  120
RQLETALLGT ESENFGIHAI TASGGATGVS IEAGRWKYMM DQMIARGDLK ELLCVCAKAI  180
ENNDMNTADC LMTQLRQMVS VSGEPIQRLG AYMLEGLVAR LASSGSSIYK SLKCKEPASA  240
ELLSYMHILY EICPYFKFGY MSANGAIADA MKDENRVHII DFQISQGGQW LTLIHALAAR  300
PGGPPSIRIT GIDDPSSAYA RGGGLQIVGQ RLSKLAESCN VPFEFHAAAI YGTDVQPENL  360
GIQPGEAIAV NFPMILHHMP DESVSTQNHR DRLLRMVKSL SPKVVTVMEQ EANTNTAPFF  420
PRFLETLNYY LAIFESIDVS LPREHKERIN VEQHCLAREI VNIIACEGPE RVERHEFMGK  480
WRSRFIMAGF TPCPLSSFVN ATIKALLQSY YDKYTLEEKD GVLYLGWMNR PIVTSCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein