PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735096.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 439aa    MW: 49373.4 Da    PI: 6.5048
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS411.95.9e-126484391374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svse...lykalppsetseknsseelaalkl........ 83 
                     +++lL++cAe vs++d+++a+ lL+ ls ++sp+gd+++Rl++ ft+AL+ r++r ++++   ++  +++ +++  +++ ++a + +        
  XP_022735096.1  48 MRQLLISCAELVSQSDFSAANGLLSILSSNSSPYGDSTERLVHQFTKALSLRINRlHGPGsllMMMNINCPTAAAATVTATIANYDIdpslqscy 142
                     589***************************************************97666522233445777777777888888884455555566 PP

            GRAS  84 ..fsevsPilkfshltaNqaIleave.geervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAee 171
                       ++++ P+++f+hltaNqaIlea++ g++ +Hi+Dfdi++G+QWp+L+qaLa+R+    ++pp lRiTg g+    + + l++tg+rL kfA++
  XP_022735096.1 143 lsLNQIAPFIRFAHLTANQAILEAIQvGQQSMHILDFDIMHGVQWPPLMQALADRSantlHPPPILRITGTGH----DLNILHRTGDRLFKFAQS 233
                     78***********************94669**************************888888***********....9***************** PP

            GRAS 172 lgvpfefnvl...vak...rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
                     lg++f+f++l     +   +++   +++L + p+E+laVn++l lhrll+++ +       +L+ +k l+P+v++++e+ea+hn++ Fl+r++ea
  XP_022735096.1 234 LGLRFQFHPLlvlN-NdptSVAINLPSMLTILPDEVLAVNCMLYLHRLLKDDSCDLR---LFLQNIKALNPTVMTIAEREANHNHPLFLHRIVEA 324
                     *********96531.212133333689**********************87777666...9********************************** PP

            GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                     l+yy+a+fdslea+lp++s+er  vE+ ++greiv++va+ g++rrerhe+le+W+ +l+++GF++vpls +a++qaklllr ++ s+gy+++  
  XP_022735096.1 325 LDYYTAIFDSLEATLPPKSQERLAVEQIWFGREIVDIVAADGENRRERHERLETWEVMLRSSGFSNVPLSPFAYSQAKLLLRLHYpSEGYQLQIL 419
                     *********************************************************************************************** PP

            GRAS 355 sgslvlgWkdrpLvsvSaWr 374
                     ++s +lgW++r+L+svS+Wr
  XP_022735096.1 420 NNSCFLGWQNRALFSVSSWR 439
                     *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MLGALNSTSN DQEEEDLLAP DLQHHPQQQP SHSTGFTSHF HSHQAIHMRQ LLISCAELVS  60
QSDFSAANGL LSILSSNSSP YGDSTERLVH QFTKALSLRI NRLHGPGSLL MMMNINCPTA  120
AAATVTATIA NYDIDPSLQS CYLSLNQIAP FIRFAHLTAN QAILEAIQVG QQSMHILDFD  180
IMHGVQWPPL MQALADRSAN TLHPPPILRI TGTGHDLNIL HRTGDRLFKF AQSLGLRFQF  240
HPLLVLNNDP TSVAINLPSM LTILPDEVLA VNCMLYLHRL LKDDSCDLRL FLQNIKALNP  300
TVMTIAEREA NHNHPLFLHR IVEALDYYTA IFDSLEATLP PKSQERLAVE QIWFGREIVD  360
IVAADGENRR ERHERLETWE VMLRSSGFSN VPLSPFAYSQ AKLLLRLHYP SEGYQLQILN  420
NSCFLGWQNR ALFSVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-137GRAS family protein