PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735172.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 251aa MW: 28362.2 Da PI: 9.2159

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	4.9e-08	140	187	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+el+P + k + a +L + Y++sLq XP_022735172.1 140 SHSLAERVRREKINEKLRCLQELVPGC----YKAMGMAVMLDVIISYVQSLQ 187 8************************98....244777777777777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MSKYLFGHSN AMSSIPELLP SSMQYSLSSE MNTDLVNLGS SDNHGLKAVS NSILFHTKQP 60 QNSMKFTVGN SYMVHESKNE NKMPTSEKPE NLSASPGSVS KSRGNNKSSI GRKRRKDEED 120 MQKRKEVIHV RAKRGQATDS HSLAERVRRE KINEKLRCLQ ELVPGCYKAM GMAVMLDVII 180 SYVQSLQNQI EFLSMKLSSA SMYYDLRFSE IEAMETIQGI KTNANEQVQE MERMVREGYG 240 GPSYNDSTWP L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	117	RKRRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	8e-57	bHLH family protein