PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735174.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 222aa MW: 25174.7 Da PI: 9.4837

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.8	4e-08	111	158	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+el+P + k + a +L + Y++sLq XP_022735174.1 111 SHSLAERVRREKINEKLRCLQELVPGC----YKAMGMAVMLDVIISYVQSLQ 158 8************************98....244777777777777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MSKYLFGHSN AMSSIPELLP SSMQYSLSSE MNTDLVNLGS SDNHGLKAVS NSILFHTKQP 60 QNSMKFTGSV SKSRGNNKSS IGRKRRKDEE DMQKRKEVIH VRAKRGQATD SHSLAERVRR 120 EKINEKLRCL QELVPGCYKA MGMAVMLDVI ISYVQSLQNQ IEFLSMKLSS ASMYYDLRFS 180 EIEAMETIQG IKTNANEQVQ EMERMVREGY GGPSYNDSTW PL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	88	RKRRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	3e-57	bHLH family protein