PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735197.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 292aa    MW: 31562.2 Da    PI: 8.4747
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-09653347
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                      W+ eE++ + +a +++  +    +W++ a++++  ++l+++k ++qk+
   XP_022735197.1  6 TWSREEEKAFENALAMHWIEdseeQWEKMASMVP-SKSLEELKQHYQKL 53
                     7*****************99**************.************97 PP
2Myb_DNA-binding391.9e-12134178347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_022735197.1 134 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 178
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAGSVTWSRE EEKAFENALA MHWIEDSEEQ WEKMASMVPS KSLEELKQHY QKLVEDVSAI  60
EAGKVPLPCY TGEEATPSPK DVHGLSGAAA ATAASDKRSN SGYGNGFSGL SHDSSGHGGK  120
GSSKSDQERR KGIPWTEEEH RLFLLGLDKF GKGDWRSISR NFVISRTPTQ VASHAQKYFI  180
RLNSMNRDRR RSSIHDITSV NNGDTSHQAP ITGQQANTNS SGAASMGQSV KQRAQPHLPG  240
LGMYGAPVRN PVAAPGHLGS AVGTPLMLPP GHHPPPYIVP VAYPMAPPPM HQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-74MYB family protein