PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735358.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 510aa MW: 56085.8 Da PI: 8.2905

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.4	1.1e-39	170	245	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l fD++krsCr+rLa+hnerrrk XP_022735358.1 170 CCQVFGCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGIEQRFCQQCSRFHLLAAFDDGKRSCRKRLAGHNERRRKL 245 6*************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MESWSYGSEG KDLLFTDEMD LPVDAFARSR KGLVGWDLKA SNSEAVESME FMDFGFADMN 60 KKPFYGNTSM GIFGAEFVND SVKKVVSPTC MITSSSYYGE EESGSKHSSP LMESNSQESS 120 LINFKLGRLT DYTDAQDGKF LKETSVVSSV RPALMVKNAR TTSSNSHTPC CQVFGCNKDL 180 SSSKDYHKRH KVCEAHSKTA KVIVNGIEQR FCQQCSRFHL LAAFDDGKRS CRKRLAGHNE 240 RRRKLHFNTL SGKPNKLLQS YQGTKIVGTS IPKRTPFVIP NIFQDDLVYP ERYGQASQYQ 300 QVKSEEKPNY SSQSAIPMSN GQLQPKSFFH MHGSGKQNVP GTFSSATEVF NAPNTASTVK 360 ELSGVARSNC ALSLLSAQSQ NLSSHAIGIQ MSRSLINQSG QAHHSSGKSA AASFLEKANG 420 FYSCGMNPVG VGQAGSVVVS DAGHTVNFEV QADGYFQDSG LLSARYCLSP ENGTTIDLLQ 480 LSTHLQRVEQ QRNSIQVKQE NEDLCYFLTT

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MESWSYGSEG KDLLFTDEMD LPVDAFARSR KGLVGWDLKA SNSEAVESME FMDFGFADMN  60
KKPFYGNTSM GIFGAEFVND SVKKVVSPTC MITSSSYYGE EESGSKHSSP LMESNSQESS  120
LINFKLGRLT DYTDAQDGKF LKETSVVSSV RPALMVKNAR TTSSNSHTPC CQVFGCNKDL  180
SSSKDYHKRH KVCEAHSKTA KVIVNGIEQR FCQQCSRFHL LAAFDDGKRS CRKRLAGHNE  240
RRRKLHFNTL SGKPNKLLQS YQGTKIVGTS IPKRTPFVIP NIFQDDLVYP ERYGQASQYQ  300
QVKSEEKPNY SSQSAIPMSN GQLQPKSFFH MHGSGKQNVP GTFSSATEVF NAPNTASTVK  360
ELSGVARSNC ALSLLSAQSQ NLSSHAIGIQ MSRSLINQSG QAHHSSGKSA AASFLEKANG  420
FYSCGMNPVG VGQAGSVVVS DAGHTVNFEV QADGYFQDSG LLSARYCLSP ENGTTIDLLQ  480
LSTHLQRVEQ QRNSIQVKQE NEDLCYFLTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-56	SBP family protein