PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735616.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 442aa MW: 50365.4 Da PI: 6.1482

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9e-17	193	239	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W eEd ll+++v+q+G + W+ Ia++++ gR +kqc++rw+++l XP_022735616.1 193 KGQWLIEEDRLLIQLVEQYGVRKWSHIAQMLP-GRIGKQCRERWHNHL 239 689999************************.***********97 PP
2	Myb_DNA-binding	54.8	2.1e-17	245	287	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd+ l++a+ + G++ W+ Ia++++ gRt++++k++w+ XP_022735616.1 245 KDTWSEEEDKVLIQAHIEIGNK-WAEIAKRLP-GRTENSIKNHWN 287 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEFDPKLSEN MTPQGQQPMV LSENCLKPCM KYDQFPSETT PSSSSSKGYY LQDFHHLDHQ 60 IHVNGSSSNP AYVVQTACYD PFDAFPYGYS TNNVDFYECK PFADNVGHGQ VMDNFQSGGF 120 LNLSQRNSNN VMGSDIGCFD LQETKPVNFV VPDEVSCVTA ENAYYKKAGM NKNRVLASNP 180 STWKGRKKSN VVKGQWLIEE DRLLIQLVEQ YGVRKWSHIA QMLPGRIGKQ CRERWHNHLR 240 PDIKKDTWSE EEDKVLIQAH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK RRQFSKRKCR 300 SKYPRGSILQ EYIKSLNLES SSTRFQEKSS NGIDATVDKS STKPSNYQPQ ALDFCPSTDR 360 LVPEYDFNEV PDFSFDEKLL QESCSIDSLL DEIHSATAAD VADNQIEKSF EMDVSVDMSP 420 VMGLSVKKEL DLVEMISRQA NI

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEFDPKLSEN MTPQGQQPMV LSENCLKPCM KYDQFPSETT PSSSSSKGYY LQDFHHLDHQ  60
IHVNGSSSNP AYVVQTACYD PFDAFPYGYS TNNVDFYECK PFADNVGHGQ VMDNFQSGGF  120
LNLSQRNSNN VMGSDIGCFD LQETKPVNFV VPDEVSCVTA ENAYYKKAGM NKNRVLASNP  180
STWKGRKKSN VVKGQWLIEE DRLLIQLVEQ YGVRKWSHIA QMLPGRIGKQ CRERWHNHLR  240
PDIKKDTWSE EEDKVLIQAH IEIGNKWAEI AKRLPGRTEN SIKNHWNATK RRQFSKRKCR  300
SKYPRGSILQ EYIKSLNLES SSTRFQEKSS NGIDATVDKS STKPSNYQPQ ALDFCPSTDR  360
LVPEYDFNEV PDFSFDEKLL QESCSIDSLL DEIHSATAAD VADNQIEKSF EMDVSVDMSP  420
VMGLSVKKEL DLVEMISRQA NI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-111	MYB family protein