PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735664.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 311aa    MW: 35063.4 Da    PI: 8.2313
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++l+ ++++ G g+W+t +++ g+ R++k+c++rw +yl
   XP_022735664.1 14 KGPWTPDEDQKLLAYIEERGFGNWRTLPEKAGLQRCGKSCRLRWINYL 61
                     79********************************************97 PP
2Myb_DNA-binding513.3e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E++ ++++++ lG++ W++Ia++++ +Rt++++k++w+++
   XP_022735664.1  67 RGKFSLQEEQTIIQLHAFLGNR-WSAIAAHLP-KRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MARSACSENM GLKKGPWTPD EDQKLLAYIE ERGFGNWRTL PEKAGLQRCG KSCRLRWINY  60
LRPDVKRGKF SLQEEQTIIQ LHAFLGNRWS AIAAHLPKRT DNEIKNYWNT HIKKRFTKMG  120
IDPTTHKPKS NLLSSSGRNT GTLSHMAQWE RARLEAETRL VRESKKLLST QNNNPGFSSR  180
SEASATSTRS QCLDVLKAWQ MVVSGMFAIS TNKVLEPPSS SSLDNSIPII ELPPAAAASS  240
FACFGGIAQD DLILDDRSNY HVPELDERFD NSMTLHDTTF HWTAATGNIV QNFSDISVHD  300
FDYPMEEGNT N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.14e-95MYB family protein