PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735740.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 151aa    MW: 17639.9 Da    PI: 5.4435
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.23.8e-172964237
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevav 37
                    + e++s+rqvtf kRr g++ KA+ELS+LC++ev +
  XP_022735740.1 29 KLEDESKRQVTFFKRRRGLFNKAKELSTLCGVEVVL 64
                    6799******************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MEDNVLMSNA TEAKKTRSSR GRQRNEIKKL EDESKRQVTF FKRRRGLFNK AKELSTLCGV  60
EVVLDRYLAE SSSQGNYSWI KQKEVKEDIS GGFWLDQSIE NMGLVELLEY AMTLNDLRKN  120
AEARVEELSI QKSTYLWQYV ADQELNKDLD F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.17e-15M-type_MADS family protein