PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735919.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 333aa    MW: 37818.6 Da    PI: 4.4258
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.8e-1995148356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t +q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa+ k
  XP_022735919.1  95 KKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLKPRQVAIWFQNRRARCK 148
                     56689***********************************************99 PP
2HD-ZIP_I/II124.26.1e-4094185192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrl+ +qv++LE+sFe e+kLeperK +la++Lgl+prqva+WFqnrRAR ktkqlEkdy++L+++y++lk++  +L ke+++L+ee+ 
  XP_022735919.1  94 EKKRRLTVDQVQFLEKSFEVENKLEPERKIQLAKDLGLKPRQVAIWFQNRRARCKTKQLEKDYDTLQASYNSLKADYGNLLKEKDKLKEEVL 185
                     69**************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAGGRVYPSN TSTAGGSNNL SVLLQSQRVP YSSEPLDPLF IPSSSPSFLV SGTRSMVSFE  60
DVHGTNSAYR SFFRTFDQEE NGDEDLDEYV HQPEKKRRLT VDQVQFLEKS FEVENKLEPE  120
RKIQLAKDLG LKPRQVAIWF QNRRARCKTK QLEKDYDTLQ ASYNSLKADY GNLLKEKDKL  180
KEEVLQLTDK LLMKEKEKRN YELSDVNTLS QEPPEKSVAA ETASEGEESK VSLVAYKQED  240
ISYAKSDIFD SDSPHYTDGV HSSLLEAADS SYPFEPDQSD LSQDEEDNLS KVLLHPPSYI  300
FPKLEDDDYS DPPASSCNSG FPVEDHAFWS WAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143151RRARCKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-39HD-ZIP family protein