PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735958.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HSF

Protein Properties

Length: 528aa MW: 57973.3 Da PI: 4.6872

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.6	3e-36	45	136	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws+++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_022735958.1 45 FLSKTYDMVDDPATDAIVSWSTTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKQLLRN 130 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_022735958.1 131 ISRRKP 136 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MDGVSSSNNS PNDASTRGGG TQTSAEPQPT PQPVPVQSAN APPPFLSKTY DMVDDPATDA 60 IVSWSTTNNS FVVWNPPEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF 120 LRGQKQLLRN ISRRKPAHGH GHQQTQQSHG HSSSVGACVE VGKFGLEEEV ERLKRDKNVL 180 MQELVRLRQQ QQATDNQLQT MVQRLQGMEQ RQQQMMSFLA KAVQSPGFLA QFVQQQNESN 240 RRINEANKKR RLKQDVIIDN EQSSASDGQI VKYQPLMNEA TAMLMQIMKG DSSPRLDSFN 300 NSHENFLIGD GLSSSNGLDG GNSSSRLSGV TLQEVPPTSG HSTYVPATSG ISGHSPSVAI 360 SEIQSSACTT SSEKITTAQF PDVSALVGAQ KPPSMSIPQT DVIMPELSEM PEMVPESIVN 420 MPTGNYVGSE TGNGGFIDPS TFDVNGSVPI ELDDIAPDPD IDALLDSSTF WEDLLVQSPV 480 LEDIESTSMD GDSKGNEGQL MDSGWDKSQH MDKLTEQMGL LRSYNKRV

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MDGVSSSNNS PNDASTRGGG TQTSAEPQPT PQPVPVQSAN APPPFLSKTY DMVDDPATDA  60
IVSWSTTNNS FVVWNPPEFA RDLLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF  120
LRGQKQLLRN ISRRKPAHGH GHQQTQQSHG HSSSVGACVE VGKFGLEEEV ERLKRDKNVL  180
MQELVRLRQQ QQATDNQLQT MVQRLQGMEQ RQQQMMSFLA KAVQSPGFLA QFVQQQNESN  240
RRINEANKKR RLKQDVIIDN EQSSASDGQI VKYQPLMNEA TAMLMQIMKG DSSPRLDSFN  300
NSHENFLIGD GLSSSNGLDG GNSSSRLSGV TLQEVPPTSG HSTYVPATSG ISGHSPSVAI  360
SEIQSSACTT SSEKITTAQF PDVSALVGAQ KPPSMSIPQT DVIMPELSEM PEMVPESIVN  420
MPTGNYVGSE TGNGGFIDPS TFDVNGSVPI ELDDIAPDPD IDALLDSSTF WEDLLVQSPV  480
LEDIESTSMD GDSKGNEGQL MDSGWDKSQH MDKLTEQMGL LRSYNKRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	254	NKKRRLKQ
2	248	253	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-122	HSF family protein