PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736089.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 237aa MW: 25840 Da PI: 5.5495

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.3	7.5e-56	49	153	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl XP_022736089.1 49 QLHMFWNYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 143 799**998899****************************************************************************** PP NF-YC 93 vdivprdelk 102 vdivprde+k XP_022736089.1 144 VDIVPRDEIK 153 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDSNQQGQSS YPPQHPTSAI TPSPSSTTTT ATPPPPPPFH HLLQQQHEQL HMFWNYQRQE 60 IEQVNDFKNH QLPLARIKKI MKADEDVRMI SAEAPILFAK ACELFILELT IRSWLHAEEN 120 KRRTLQKNDI AAAITRTDIF DFLVDIVPRD EIKDEAGLGG MVGATAGGVP YFYPPMGQPA 180 GGPGGMMIGR PAVDPTAGIF AQPPSQAWQS VWQTAGAEDG SFGSGGNRGQ GNLDGQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	128	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	4e-81	NF-YC family protein