PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736169.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 331aa MW: 36749.8 Da PI: 6.4034

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl XP_022736169.1 14 KGPWTPEEDIRLVSYIQEHGPGNWRSVPINTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.1	2.6e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022736169.1 67 RGSFTEKEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGRPPCCDKI SVKKGPWTPE EDIRLVSYIQ EHGPGNWRSV PINTGLLRCS KSCRLRWTNY 60 LRPGIKRGSF TEKEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ 120 IDVDGQNQDG FSSSQSVSKG QWERRLQTDI GMAKQALSEA LSLDKPNSLT NSKDFSLSHP 180 YLRPSQSQAS TYASSAENIS RLLENWMKNP PNPAAHQINS AETMTQNSFN NTTTAGSSSS 240 DEGALSATTS EGFDSFFSFN SSNSDVSHES VSADLNANLT TENSVFQDES KPNLGAQVPL 300 TLIEKWLLDD GSAQDHEDLI NMSLGDSVGL Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-104	MYB family protein