PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736242.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 538aa MW: 59844.2 Da PI: 6.6355

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	47.5	2.4e-15	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+ +TplWR+gp ++ LCnaCG ++r kg+ XP_022736242.1 7 CYHCGVASTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RGEPDGYEDH 60 RASRMKSISI NKNKEVKVLK RKPNHDTAVV VPDYNLGFRK FVEEDASNRS SSGSAISNSE 120 SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTCVNRPKPS SVEKLTKDLY TILHEQQSSY 180 FSGSSEEDLL LESEMPMVSV EIGHGSVLIR HPSSIAREEE SEASSLTVEN KQYSMNEAYS 240 HSSSFPVYND RKMKFSGCGI ERAKNPAAQG MQHEQLKRDK AQHEKSLMLE SHNSPLCNID 300 LNDILNFDEF VKYLTNEEQQ QLLQYLPPLD IAQLPDSLKS MFESPQFKEN LCYFQQLLEE 360 GVFNISAPGV KTEDCMTLKR LALFNLTKSH WVERYHVLKA CKSSIGESVT ASGPNAITSN 420 NLVIMKRSCD SHSQNFPEAR TLKSPKRVIM KSTYESKDLI DNDGSCFSPR SLFALPPDGS 480 SLLLDSLHFV DESFEQDLLL DVPPNGSFPQ AELLHPTLSF GKQASTSSSS AHSHLVHP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RGEPDGYEDH  60
RASRMKSISI NKNKEVKVLK RKPNHDTAVV VPDYNLGFRK FVEEDASNRS SSGSAISNSE  120
SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTCVNRPKPS SVEKLTKDLY TILHEQQSSY  180
FSGSSEEDLL LESEMPMVSV EIGHGSVLIR HPSSIAREEE SEASSLTVEN KQYSMNEAYS  240
HSSSFPVYND RKMKFSGCGI ERAKNPAAQG MQHEQLKRDK AQHEKSLMLE SHNSPLCNID  300
LNDILNFDEF VKYLTNEEQQ QLLQYLPPLD IAQLPDSLKS MFESPQFKEN LCYFQQLLEE  360
GVFNISAPGV KTEDCMTLKR LALFNLTKSH WVERYHVLKA CKSSIGESVT ASGPNAITSN  420
NLVIMKRSCD SHSQNFPEAR TLKSPKRVIM KSTYESKDLI DNDGSCFSPR SLFALPPDGS  480
SLLLDSLHFV DESFEQDLLL DVPPNGSFPQ AELLHPTLSF GKQASTSSSS AHSHLVHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-151	GATA family protein