PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736243.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 532aa MW: 59336.6 Da PI: 6.4187

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	35.3	1.6e-11	3	35	3	35
GATA 3 nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C + TplWR+gp ++ LCnaCG ++r kg+ XP_022736243.1 3 TCEEKCTPLWRNGPPEKPVLCNACGSRWRTKGT 35 699999******88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MSTCEEKCTP LWRNGPPEKP VLCNACGSRW RTKGTLANYT PLHARGEPDG YEDHRASRMK 60 SISINKNKEV KVLKRKPNHD TAVVVPDYNL GFRKFVEEDA SNRSSSGSAI SNSESCAQFG 120 SADASDLTGP AQSNVWDSMV PSKKRTCVNR PKPSSVEKLT KDLYTILHEQ QSSYFSGSSE 180 EDLLLESEMP MVSVEIGHGS VLIRHPSSIA REEESEASSL TVENKQYSMN EAYSHSSSFP 240 VYNDRKMKFS GCGIERAKNP AAQGMQHEQL KRDKAQHEKS LMLESHNSPL CNIDLNDILN 300 FDEFVKYLTN EEQQQLLQYL PPLDIAQLPD SLKSMFESPQ FKENLCYFQQ LLEEGVFNIS 360 APGVKTEDCM TLKRLALFNL TKSHWVERYH VLKACKSSIG ESVTASGPNA ITSNNLVIMK 420 RSCDSHSQNF PEARTLKSPK RVIMKSTYES KDLIDNDGSC FSPRSLFALP PDGSSLLLDS 480 LHFVDESFEQ DLLLDVPPNG SFPQAELLHP TLSFGKQAST SSSSAHSHLV HP

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MSTCEEKCTP LWRNGPPEKP VLCNACGSRW RTKGTLANYT PLHARGEPDG YEDHRASRMK  60
SISINKNKEV KVLKRKPNHD TAVVVPDYNL GFRKFVEEDA SNRSSSGSAI SNSESCAQFG  120
SADASDLTGP AQSNVWDSMV PSKKRTCVNR PKPSSVEKLT KDLYTILHEQ QSSYFSGSSE  180
EDLLLESEMP MVSVEIGHGS VLIRHPSSIA REEESEASSL TVENKQYSMN EAYSHSSSFP  240
VYNDRKMKFS GCGIERAKNP AAQGMQHEQL KRDKAQHEKS LMLESHNSPL CNIDLNDILN  300
FDEFVKYLTN EEQQQLLQYL PPLDIAQLPD SLKSMFESPQ FKENLCYFQQ LLEEGVFNIS  360
APGVKTEDCM TLKRLALFNL TKSHWVERYH VLKACKSSIG ESVTASGPNA ITSNNLVIMK  420
RSCDSHSQNF PEARTLKSPK RVIMKSTYES KDLIDNDGSC FSPRSLFALP PDGSSLLLDS  480
LHFVDESFEQ DLLLDVPPNG SFPQAELLHP TLSFGKQAST SSSSAHSHLV HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-140	GATA family protein