PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736244.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 506aa MW: 56137.9 Da PI: 6.2333

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	47.6	2.2e-15	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+ +TplWR+gp ++ LCnaCG ++r kg+ XP_022736244.1 7 CYHCGVASTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RGEPDGYEDH 60 RASRMKSISI NKNKEVKVLK RKPNHDTAVV VPDYNLGFRK FVEEDASNRS SSGSAISNSE 120 SCAQFGSADA SDLTGPAQSN VWDSMSSYFS GSSEEDLLLE SEMPMVSVEI GHGSVLIRHP 180 SSIAREEESE ASSLTVENKQ YSMNEAYSHS SSFPVYNDRK MKFSGCGIER AKNPAAQGMQ 240 HEQLKRDKAQ HEKSLMLESH NSPLCNIDLN DILNFDEFVK YLTNEEQQQL LQYLPPLDIA 300 QLPDSLKSMF ESPQFKENLC YFQQLLEEGV FNISAPGVKT EDCMTLKRLA LFNLTKSHWV 360 ERYHVLKACK SSIGESVTAS GPNAITSNNL VIMKRSCDSH SQNFPEARTL KSPKRVIMKS 420 TYESKDLIDN DGSCFSPRSL FALPPDGSSL LLDSLHFVDE SFEQDLLLDV PPNGSFPQAE 480 LLHPTLSFGK QASTSSSSAH SHLVHP

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MGKQGPCYHC GVASTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RGEPDGYEDH  60
RASRMKSISI NKNKEVKVLK RKPNHDTAVV VPDYNLGFRK FVEEDASNRS SSGSAISNSE  120
SCAQFGSADA SDLTGPAQSN VWDSMSSYFS GSSEEDLLLE SEMPMVSVEI GHGSVLIRHP  180
SSIAREEESE ASSLTVENKQ YSMNEAYSHS SSFPVYNDRK MKFSGCGIER AKNPAAQGMQ  240
HEQLKRDKAQ HEKSLMLESH NSPLCNIDLN DILNFDEFVK YLTNEEQQQL LQYLPPLDIA  300
QLPDSLKSMF ESPQFKENLC YFQQLLEEGV FNISAPGVKT EDCMTLKRLA LFNLTKSHWV  360
ERYHVLKACK SSIGESVTAS GPNAITSNNL VIMKRSCDSH SQNFPEARTL KSPKRVIMKS  420
TYESKDLIDN DGSCFSPRSL FALPPDGSSL LLDSLHFVDE SFEQDLLLDV PPNGSFPQAE  480
LLHPTLSFGK QASTSSSSAH SHLVHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-123	GATA family protein