PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736247.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 427aa MW: 46586.8 Da PI: 4.6366

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.6e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd+ l+ +++++G g W++ +++ g++R++k+c++rw++yl XP_022736247.1 30 RGTWTAEEDQNLIAYIQKHGEGGWRSLPEKAGLRRCGKSCRLRWLNYL 77 89********************************************97 PP
2	Myb_DNA-binding	50	7.1e-16	83	127	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T eE + ++++++ lG++ W++Iar+++ +Rt++++k++w+ + XP_022736247.1 83 RGDFTSEEAQSIIELHAALGNR-WAAIARHLP-KRTDNEIKNYWNAH 127 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MLLILSHKIT LICFIRMERT LLDSEDNLKR GTWTAEEDQN LIAYIQKHGE GGWRSLPEKA 60 GLRRCGKSCR LRWLNYLRPG VKRGDFTSEE AQSIIELHAA LGNRWAAIAR HLPKRTDNEI 120 KNYWNAHLKK RLVNMGIDPV THKPVGTTPG ASSSENSNNT VVNTDPMIIH EENATSKESE 180 PPQQPTSSRS TSASALLLNK LATRVTTLQC FDLDPLRAFS SLQPMSFNGN TSNASADSES 240 STATICHPTS SCQGNNASIA PDTSDYWLDN ISDPLTTPLN CLDLSNIVLS PVSADHGNVG 300 DDVGVSVDAN IEYSDLSNAL SILEGNASEP ANSCSSTSSR VLDDMASKLA SLRSFDELQD 360 WQNTNTIPPG PIQGDHSVIT TTTGDGGLSA CDINIEDMIF DTVGSAVFYK PNYLENELEP 420 SYLFDIP

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MLLILSHKIT LICFIRMERT LLDSEDNLKR GTWTAEEDQN LIAYIQKHGE GGWRSLPEKA  60
GLRRCGKSCR LRWLNYLRPG VKRGDFTSEE AQSIIELHAA LGNRWAAIAR HLPKRTDNEI  120
KNYWNAHLKK RLVNMGIDPV THKPVGTTPG ASSSENSNNT VVNTDPMIIH EENATSKESE  180
PPQQPTSSRS TSASALLLNK LATRVTTLQC FDLDPLRAFS SLQPMSFNGN TSNASADSES  240
STATICHPTS SCQGNNASIA PDTSDYWLDN ISDPLTTPLN CLDLSNIVLS PVSADHGNVG  300
DDVGVSVDAN IEYSDLSNAL SILEGNASEP ANSCSSTSSR VLDDMASKLA SLRSFDELQD  360
WQNTNTIPPG PIQGDHSVIT TTTGDGGLSA CDINIEDMIF DTVGSAVFYK PNYLENELEP  420
SYLFDIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	6e-67	MYB family protein