PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736357.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Nin-like

Protein Properties

Length: 989aa MW: 108634 Da PI: 5.2404

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.4e-29	585	636	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022736357.1 585 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 636 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 989 aa Download sequence
MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE 60 QPCSPLWAFP DEDKLGSAAA YAGLPLAPAV NAGTSNPVNE NPKEDGDNRG LPSPFLELLP 120 LEDPDSYCVI KQRMTQALRY FKESTEQHVL AQVWAPVKCG GRYMLTTSGQ PFVLDSHSNG 180 LHQYRMVSLM YMFSVDGESD EQLGLPGRVF WKKLPEWTPN VQYYSIREYS RLDHALHYNV 240 QGTLALPVFE PSRQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS EILDHPSTQI 300 CNKSRQNALA EILEILSVIC ETYKLPLAQT WVACRHRSVL AYGGGLKKSC TSFDGSCMGQ 360 VCMSTTDVAF YVVDAHMWGF REACLEHHLQ KGQGVVGRAF LSHNSCFCAD ITQFCKTEYP 420 LVHYARMFGL TSCFAICLRS TYTGDDDYVL EFFLSPAIAD RNEQQNLLGS ILATMKRHFQ 480 CLKVASGAEL AEDEGSIEII EASSDERLDS RLESIPIPPS VKSPPGTYTS PNRGELQLYS 540 SKQQLTVNFD PASDGGNVFA SGCQNPVCLP QNKELKKSGR KRGKAEKSIS LEVLQQYFAG 600 SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL TKLKRVIESV QGADGAFGLT 660 SLATSPIPAA VGSISWPNSL NGSNQQNSPN SKPSKPHGEK IDSPTCRTPG SNEEALVEDR 720 LLGRRTLSQE ELFPLQNGFL PDLEKAANRS KTGSGSREES AGTPTSHGSC QGSPAIESAA 780 TKYPRGSIHE QCGFPELTFQ PLGELNISAT SSMPEALVTT EPEEPFGGML VEDAGSSKDL 840 RNLCPSTAEV GVDERFPESS WTPAPCSGLA LKQAMATFTQ TTPFVTARQE MKSATIKATY 900 REDIIRFRIS LSSGILELKE EVAKRLKLEV GTFDIKYLDD DNEWVLIACD ADLQECVDVS 960 RSSGSNIIRL SVHDAMANLG SSCESTGEL

Sequence ? help Back to Top

Protein Sequence Length: 989 aa Download sequence

MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE  60
QPCSPLWAFP DEDKLGSAAA YAGLPLAPAV NAGTSNPVNE NPKEDGDNRG LPSPFLELLP  120
LEDPDSYCVI KQRMTQALRY FKESTEQHVL AQVWAPVKCG GRYMLTTSGQ PFVLDSHSNG  180
LHQYRMVSLM YMFSVDGESD EQLGLPGRVF WKKLPEWTPN VQYYSIREYS RLDHALHYNV  240
QGTLALPVFE PSRQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS EILDHPSTQI  300
CNKSRQNALA EILEILSVIC ETYKLPLAQT WVACRHRSVL AYGGGLKKSC TSFDGSCMGQ  360
VCMSTTDVAF YVVDAHMWGF REACLEHHLQ KGQGVVGRAF LSHNSCFCAD ITQFCKTEYP  420
LVHYARMFGL TSCFAICLRS TYTGDDDYVL EFFLSPAIAD RNEQQNLLGS ILATMKRHFQ  480
CLKVASGAEL AEDEGSIEII EASSDERLDS RLESIPIPPS VKSPPGTYTS PNRGELQLYS  540
SKQQLTVNFD PASDGGNVFA SGCQNPVCLP QNKELKKSGR KRGKAEKSIS LEVLQQYFAG  600
SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL TKLKRVIESV QGADGAFGLT  660
SLATSPIPAA VGSISWPNSL NGSNQQNSPN SKPSKPHGEK IDSPTCRTPG SNEEALVEDR  720
LLGRRTLSQE ELFPLQNGFL PDLEKAANRS KTGSGSREES AGTPTSHGSC QGSPAIESAA  780
TKYPRGSIHE QCGFPELTFQ PLGELNISAT SSMPEALVTT EPEEPFGGML VEDAGSSKDL  840
RNLCPSTAEV GVDERFPESS WTPAPCSGLA LKQAMATFTQ TTPFVTARQE MKSATIKATY  900
REDIIRFRIS LSSGILELKE EVAKRLKLEV GTFDIKYLDD DNEWVLIACD ADLQECVDVS  960
RSSGSNIIRL SVHDAMANLG SSCESTGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	579	585	GRKRGKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein