PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736358.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Nin-like

Protein Properties

Length: 986aa MW: 108349 Da PI: 5.2404

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.4e-29	582	633	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022736358.1 582 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 633 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE 60 QPCSPLWAFP DEDKLGSAAA YAGLPLAPAG TSNPVNENPK EDGDNRGLPS PFLELLPLED 120 PDSYCVIKQR MTQALRYFKE STEQHVLAQV WAPVKCGGRY MLTTSGQPFV LDSHSNGLHQ 180 YRMVSLMYMF SVDGESDEQL GLPGRVFWKK LPEWTPNVQY YSIREYSRLD HALHYNVQGT 240 LALPVFEPSR QSCVGVLELI MTSQKINYAP EVDKVCKALE AVNLKSSEIL DHPSTQICNK 300 SRQNALAEIL EILSVICETY KLPLAQTWVA CRHRSVLAYG GGLKKSCTSF DGSCMGQVCM 360 STTDVAFYVV DAHMWGFREA CLEHHLQKGQ GVVGRAFLSH NSCFCADITQ FCKTEYPLVH 420 YARMFGLTSC FAICLRSTYT GDDDYVLEFF LSPAIADRNE QQNLLGSILA TMKRHFQCLK 480 VASGAELAED EGSIEIIEAS SDERLDSRLE SIPIPPSVKS PPGTYTSPNR GELQLYSSKQ 540 QLTVNFDPAS DGGNVFASGC QNPVCLPQNK ELKKSGRKRG KAEKSISLEV LQQYFAGSLK 600 DAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLTKL KRVIESVQGA DGAFGLTSLA 660 TSPIPAAVGS ISWPNSLNGS NQQNSPNSKP SKPHGEKIDS PTCRTPGSNE EALVEDRLLG 720 RRTLSQEELF PLQNGFLPDL EKAANRSKTG SGSREESAGT PTSHGSCQGS PAIESAATKY 780 PRGSIHEQCG FPELTFQPLG ELNISATSSM PEALVTTEPE EPFGGMLVED AGSSKDLRNL 840 CPSTAEVGVD ERFPESSWTP APCSGLALKQ AMATFTQTTP FVTARQEMKS ATIKATYRED 900 IIRFRISLSS GILELKEEVA KRLKLEVGTF DIKYLDDDNE WVLIACDADL QECVDVSRSS 960 GSNIIRLSVH DAMANLGSSC ESTGEL

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE  60
QPCSPLWAFP DEDKLGSAAA YAGLPLAPAG TSNPVNENPK EDGDNRGLPS PFLELLPLED  120
PDSYCVIKQR MTQALRYFKE STEQHVLAQV WAPVKCGGRY MLTTSGQPFV LDSHSNGLHQ  180
YRMVSLMYMF SVDGESDEQL GLPGRVFWKK LPEWTPNVQY YSIREYSRLD HALHYNVQGT  240
LALPVFEPSR QSCVGVLELI MTSQKINYAP EVDKVCKALE AVNLKSSEIL DHPSTQICNK  300
SRQNALAEIL EILSVICETY KLPLAQTWVA CRHRSVLAYG GGLKKSCTSF DGSCMGQVCM  360
STTDVAFYVV DAHMWGFREA CLEHHLQKGQ GVVGRAFLSH NSCFCADITQ FCKTEYPLVH  420
YARMFGLTSC FAICLRSTYT GDDDYVLEFF LSPAIADRNE QQNLLGSILA TMKRHFQCLK  480
VASGAELAED EGSIEIIEAS SDERLDSRLE SIPIPPSVKS PPGTYTSPNR GELQLYSSKQ  540
QLTVNFDPAS DGGNVFASGC QNPVCLPQNK ELKKSGRKRG KAEKSISLEV LQQYFAGSLK  600
DAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLTKL KRVIESVQGA DGAFGLTSLA  660
TSPIPAAVGS ISWPNSLNGS NQQNSPNSKP SKPHGEKIDS PTCRTPGSNE EALVEDRLLG  720
RRTLSQEELF PLQNGFLPDL EKAANRSKTG SGSREESAGT PTSHGSCQGS PAIESAATKY  780
PRGSIHEQCG FPELTFQPLG ELNISATSSM PEALVTTEPE EPFGGMLVED AGSSKDLRNL  840
CPSTAEVGVD ERFPESSWTP APCSGLALKQ AMATFTQTTP FVTARQEMKS ATIKATYRED  900
IIRFRISLSS GILELKEEVA KRLKLEVGTF DIKYLDDDNE WVLIACDADL QECVDVSRSS  960
GSNIIRLSVH DAMANLGSSC ESTGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	576	582	GRKRGKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein