PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736359.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Nin-like

Protein Properties

Length: 959aa MW: 105277 Da PI: 5.2284

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	555	606	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022736359.1 555 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 606 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE 60 QPCSPLWAFP DEDKLGSAAA YAGLPLAPAV NAGTSNPVNE NPKEDGDNRG LPSPFLELLP 120 LEDPDSYCVI KQRMTQALRY FKESTEQHVL AQVWAPVKCG GRYMLTTSGQ PFVLDSHSNG 180 LHQYRMVSLM YMFSVDGESD EQLGLPGRVF WKKLPEWTPN VQYYSIREYS RLDHALHYNV 240 QGTLALPVFE PSRQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS EILDHPSTQT 300 WVACRHRSVL AYGGGLKKSC TSFDGSCMGQ VCMSTTDVAF YVVDAHMWGF REACLEHHLQ 360 KGQGVVGRAF LSHNSCFCAD ITQFCKTEYP LVHYARMFGL TSCFAICLRS TYTGDDDYVL 420 EFFLSPAIAD RNEQQNLLGS ILATMKRHFQ CLKVASGAEL AEDEGSIEII EASSDERLDS 480 RLESIPIPPS VKSPPGTYTS PNRGELQLYS SKQQLTVNFD PASDGGNVFA SGCQNPVCLP 540 QNKELKKSGR KRGKAEKSIS LEVLQQYFAG SLKDAAKSLG VCPTTMKRIC RQHGISRWPS 600 RKINKVNRSL TKLKRVIESV QGADGAFGLT SLATSPIPAA VGSISWPNSL NGSNQQNSPN 660 SKPSKPHGEK IDSPTCRTPG SNEEALVEDR LLGRRTLSQE ELFPLQNGFL PDLEKAANRS 720 KTGSGSREES AGTPTSHGSC QGSPAIESAA TKYPRGSIHE QCGFPELTFQ PLGELNISAT 780 SSMPEALVTT EPEEPFGGML VEDAGSSKDL RNLCPSTAEV GVDERFPESS WTPAPCSGLA 840 LKQAMATFTQ TTPFVTARQE MKSATIKATY REDIIRFRIS LSSGILELKE EVAKRLKLEV 900 GTFDIKYLDD DNEWVLIACD ADLQECVDVS RSSGSNIIRL SVHDAMANLG SSCESTGEL

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MCEPGEDNVC PFPPRQQQQP QQNQEIVDLY DLDLESSWTL EQLTFPSNRT SSFFISSSAE  60
QPCSPLWAFP DEDKLGSAAA YAGLPLAPAV NAGTSNPVNE NPKEDGDNRG LPSPFLELLP  120
LEDPDSYCVI KQRMTQALRY FKESTEQHVL AQVWAPVKCG GRYMLTTSGQ PFVLDSHSNG  180
LHQYRMVSLM YMFSVDGESD EQLGLPGRVF WKKLPEWTPN VQYYSIREYS RLDHALHYNV  240
QGTLALPVFE PSRQSCVGVL ELIMTSQKIN YAPEVDKVCK ALEAVNLKSS EILDHPSTQT  300
WVACRHRSVL AYGGGLKKSC TSFDGSCMGQ VCMSTTDVAF YVVDAHMWGF REACLEHHLQ  360
KGQGVVGRAF LSHNSCFCAD ITQFCKTEYP LVHYARMFGL TSCFAICLRS TYTGDDDYVL  420
EFFLSPAIAD RNEQQNLLGS ILATMKRHFQ CLKVASGAEL AEDEGSIEII EASSDERLDS  480
RLESIPIPPS VKSPPGTYTS PNRGELQLYS SKQQLTVNFD PASDGGNVFA SGCQNPVCLP  540
QNKELKKSGR KRGKAEKSIS LEVLQQYFAG SLKDAAKSLG VCPTTMKRIC RQHGISRWPS  600
RKINKVNRSL TKLKRVIESV QGADGAFGLT SLATSPIPAA VGSISWPNSL NGSNQQNSPN  660
SKPSKPHGEK IDSPTCRTPG SNEEALVEDR LLGRRTLSQE ELFPLQNGFL PDLEKAANRS  720
KTGSGSREES AGTPTSHGSC QGSPAIESAA TKYPRGSIHE QCGFPELTFQ PLGELNISAT  780
SSMPEALVTT EPEEPFGGML VEDAGSSKDL RNLCPSTAEV GVDERFPESS WTPAPCSGLA  840
LKQAMATFTQ TTPFVTARQE MKSATIKATY REDIIRFRIS LSSGILELKE EVAKRLKLEV  900
GTFDIKYLDD DNEWVLIACD ADLQECVDVS RSSGSNIIRL SVHDAMANLG SSCESTGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	549	555	GRKRGKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein