PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736427.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1691aa MW: 191554 Da PI: 9.1533

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	1600	1622	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022736427.1 1600 CPvkGCGKKFFSHKYLVQHRRVH 1622 9999*****************99 PP
2	zf-C2H2	11.6	0.00088	1658	1684	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_022736427.1 1658 YVCAeeGCGQTFRFVSDFSRHKRKtgH 1684 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1691 aa Download sequence
MAASSLSPEP SQEVFSWLKS LPLAPEYRPT LAEFQDPIAY IFKIEKEASL YGICKIIPPV 60 PPAPKKTAIG NLNRSLLARA AANASSDLKP APTFTTRQQQ IGFCPRKPRP VQKPVWQSGE 120 YYTFQEFETK AKSFEKTYLK KYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV 180 PLNSKKSSGG GREAGEAVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS 240 WFAWHVEDHD LHSLNYLHMG ASKTWYGVPR DAAVAFEEVV MVDGYGGEFN PLVTFSTLGE 300 KTTVMSPEVF VRAGIPCCRL VQNAGEFVIT FPRAYHSGFS HGFNFGEAAN IATPEWLTVA 360 RDAAIRRASI NYPPMVSHIQ LLYDLALEFC SRVPMSISAK PKSTRLKDKK KSEGETVVKK 420 LFVQSLKQNN DLLHILGKGS SVVLLPKSSD ISLCSDLRVA SQLRTNPRMS LGLFNYKEVV 480 KSPKDLATDE IMPGGNEETK GVKGFYSAKG KFVTMYEGNQ DSSFSGTDYL CRLPVRTLNM 540 SMERENAVQG DALSDQRLFS CVTCGILCFA CVAVLQPTEQ AARYLMSADC SFFNDWTVSS 600 GVTRNGFTAA QGDAITSEQN PFTRWMNKRA PNALYDVPVQ SVECKFRLVD QSIPVVEDTE 660 KGGDTSALGL LASTYGNSSD SEEDHVEPKA TVSGDETNPA KVSCERKFQY NESGFSPGDV 720 SGSHNPSLSR LDKEEAPVHV IDGYSEPGSR RVDVKNRSPQ TFDSTIEVET DNLASRRSNG 780 LEDKFRDPIT ASHANPSYSP ATHGTEKMRF GKAVVPMENA DIPYAPRSDE DSSRMHVFCL 840 EHAVEVEQQL RQIGGVHVFL LCHPEYPKIE AEAKSVAEEL GIDYTWSDIL FGDATKDDEE 900 RIHSALDSED AIPGNGDWAV KLGINLFYSA NLSRSTLYSK QMPYNCVIYS AFGRNSLVSS 960 PSKLNVYGRR SGKQKKVVAG KWCGKVWMSN QVHPFLAQRD PDEQEQERSF HAWATSDENL 1020 ERKPENVLKA ETTKVAKKFN RKRKMRAGIA PRKKVKYIEP EGAASDDSLD GSSLRQQQRF 1080 SRGKQPRLIE KEEAISYDSL EDDSLLQHRN LTRNKQAKFI EREDAESEDA EEDFTHQQHW 1140 RNLRGKQGKY IEEDDAVSGD SLDERSLKQY RRIPRSWRAK YLEREDALSD DEQEEISHQL 1200 HRRIHRGRQI KSFERNDAIS DDSLADNSLK QYKRMRKGKQ SKFFERDDAM PDDASDDDSQ 1260 HQLRRIPRGK QMKCIERDDA XADDASDDDS QHQLRRSPRG KQMKCIERDD AFSDDSLEDN 1320 PQQQHRRIPR NKVAKFTDRE AVVSFDSLKG NSHQQHRRVP RRQLTKFIER EDAVSSDSPD 1380 DSSLQHHRRI PRSKQSKILG REDGVSDDSQ DDTSLQQLRK TPRSRQGKFI ERENAVSYDS 1440 MDENYHQPNR RSLRSRKRKA QTPRQKKQDT PQNVKQGKRR TTKQVASQQV KQETLRNQNI 1500 KIDRSARRCN SYGEDEIEGG PSTRLRKRIQ KPLKVSETKP KENKQAGKKK VNNSSNLKAL 1560 AGHNTVKVRD EEAEYQCDME GCIMRFGSKQ ELIQHKRNIC PVKGCGKKFF SHKYLVQHRR 1620 VHMDDRPLKC PWKGCKMTFK WPWARTEHIR VHTGARPYVC AEEGCGQTFR FVSDFSRHKR 1680 KTGHSAKKGR G

Sequence ? help Back to Top

Protein Sequence Length: 1691 aa Download sequence

MAASSLSPEP SQEVFSWLKS LPLAPEYRPT LAEFQDPIAY IFKIEKEASL YGICKIIPPV  60
PPAPKKTAIG NLNRSLLARA AANASSDLKP APTFTTRQQQ IGFCPRKPRP VQKPVWQSGE  120
YYTFQEFETK AKSFEKTYLK KYSKKGSLSA LEVETLFWKA TVDKPFSVEY ANDMPGSAFV  180
PLNSKKSSGG GREAGEAVTV GETPWNMRAV SRAKGSLLRF MKEEIPGVTS PMVYIAMLFS  240
WFAWHVEDHD LHSLNYLHMG ASKTWYGVPR DAAVAFEEVV MVDGYGGEFN PLVTFSTLGE  300
KTTVMSPEVF VRAGIPCCRL VQNAGEFVIT FPRAYHSGFS HGFNFGEAAN IATPEWLTVA  360
RDAAIRRASI NYPPMVSHIQ LLYDLALEFC SRVPMSISAK PKSTRLKDKK KSEGETVVKK  420
LFVQSLKQNN DLLHILGKGS SVVLLPKSSD ISLCSDLRVA SQLRTNPRMS LGLFNYKEVV  480
KSPKDLATDE IMPGGNEETK GVKGFYSAKG KFVTMYEGNQ DSSFSGTDYL CRLPVRTLNM  540
SMERENAVQG DALSDQRLFS CVTCGILCFA CVAVLQPTEQ AARYLMSADC SFFNDWTVSS  600
GVTRNGFTAA QGDAITSEQN PFTRWMNKRA PNALYDVPVQ SVECKFRLVD QSIPVVEDTE  660
KGGDTSALGL LASTYGNSSD SEEDHVEPKA TVSGDETNPA KVSCERKFQY NESGFSPGDV  720
SGSHNPSLSR LDKEEAPVHV IDGYSEPGSR RVDVKNRSPQ TFDSTIEVET DNLASRRSNG  780
LEDKFRDPIT ASHANPSYSP ATHGTEKMRF GKAVVPMENA DIPYAPRSDE DSSRMHVFCL  840
EHAVEVEQQL RQIGGVHVFL LCHPEYPKIE AEAKSVAEEL GIDYTWSDIL FGDATKDDEE  900
RIHSALDSED AIPGNGDWAV KLGINLFYSA NLSRSTLYSK QMPYNCVIYS AFGRNSLVSS  960
PSKLNVYGRR SGKQKKVVAG KWCGKVWMSN QVHPFLAQRD PDEQEQERSF HAWATSDENL  1020
ERKPENVLKA ETTKVAKKFN RKRKMRAGIA PRKKVKYIEP EGAASDDSLD GSSLRQQQRF  1080
SRGKQPRLIE KEEAISYDSL EDDSLLQHRN LTRNKQAKFI EREDAESEDA EEDFTHQQHW  1140
RNLRGKQGKY IEEDDAVSGD SLDERSLKQY RRIPRSWRAK YLEREDALSD DEQEEISHQL  1200
HRRIHRGRQI KSFERNDAIS DDSLADNSLK QYKRMRKGKQ SKFFERDDAM PDDASDDDSQ  1260
HQLRRIPRGK QMKCIERDDA XADDASDDDS QHQLRRSPRG KQMKCIERDD AFSDDSLEDN  1320
PQQQHRRIPR NKVAKFTDRE AVVSFDSLKG NSHQQHRRVP RRQLTKFIER EDAVSSDSPD  1380
DSSLQHHRRI PRSKQSKILG REDGVSDDSQ DDTSLQQLRK TPRSRQGKFI ERENAVSYDS  1440
MDENYHQPNR RSLRSRKRKA QTPRQKKQDT PQNVKQGKRR TTKQVASQQV KQETLRNQNI  1500
KIDRSARRCN SYGEDEIEGG PSTRLRKRIQ KPLKVSETKP KENKQAGKKK VNNSSNLKAL  1560
AGHNTVKVRD EEAEYQCDME GCIMRFGSKQ ELIQHKRNIC PVKGCGKKFF SHKYLVQHRR  1620
VHMDDRPLKC PWKGCKMTFK WPWARTEHIR VHTGARPYVC AEEGCGQTFR FVSDFSRHKR  1680
KTGHSAKKGR G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1042	1054	KRKMRAGIAPRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein