PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736602.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 587aa    MW: 63629.1 Da    PI: 6.5284
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS343.34.1e-1052195872374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++++e+A a+s+g+   ++++L+rl + a+ +g++ qRl  +++ AL++r+++    l ++ p+ e     s+e++aa++l+++ sP++k+++l
  XP_022736602.1 219 KQTIMEAASAISEGKIDVVNEILTRLAQVANGKGNSEQRLMECMLLALKSRVNS----LENTPPVAELF---SKEHAAATQLLYDRSPCFKLGFL 306
                     5789*************************************************9....55555555554...99********************* PP

            GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +a  aIl+a+  +   +++H+iDfdi+qG+Q+  Ll+aL++R +g p +++iT++++  +g  e+l+ + + L+++A+++g+ ++fnv++  +l+
  XP_022736602.1 307 AAHMAILDATLDQpscNKLHVIDFDIGQGGQYRDLLHALSERGRGNPaMVKITAIAD--NGGDERLKMVDDTLSQIADRFGICLKFNVVAGLKLS 399
                     *********998878899************************955554*********..77***************************9888*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ e+L ++p+E laVn++++l+r++desvs+e++rde+L+ vk+l P+vv++veqe+++n+++F+ r+ ea+ yy alf+s+e +++re+ er
  XP_022736602.1 400 DLSRESLGCEPDEPLAVNFAFKLYRMPDESVSVENPRDELLRRVKGLAPRVVTLVEQEINTNTAPFASRVGEACGYYGALFESIELTVSREKPER 494
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll.rkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +k++++ l r+i n vaceg++r+er+e ++kWr+r+++aGF+  pls+++a+++++ l      + g++v+ee+g + +gW++r+L+++SaWr
  XP_022736602.1 495 VKLDEA-LMRKIANSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQNVAESMRAGLiYGKRvNPGFTVKEENGGVSFGWMGRTLTVASAWR 587
                     ******.99*******************************************999874413333589**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MASGFSGGGS DFYGGITGRS VAKTGIMSNN QPTAPYGPQV HGIFVDQASQ IMNRATPSLI  60
GKRTLADFQT QQLQNNHAGL SSLYIRSRNG VPLLQQLRPQ QLRLGITSGA TIQAVSPGLS  120
GAQFMKPVQG RVVQAQDPEK KMMNQLQELE KQLLDDDNDE EGDAVSVITN NNSEWSETIQ  180
NLVSSGSPNN PIAPSPTSST TSSSSSTSSA ASPSSTCSKQ TIMEAASAIS EGKIDVVNEI  240
LTRLAQVANG KGNSEQRLME CMLLALKSRV NSLENTPPVA ELFSKEHAAA TQLLYDRSPC  300
FKLGFLAAHM AILDATLDQP SCNKLHVIDF DIGQGGQYRD LLHALSERGR GNPAMVKITA  360
IADNGGDERL KMVDDTLSQI ADRFGICLKF NVVAGLKLSD LSRESLGCEP DEPLAVNFAF  420
KLYRMPDESV SVENPRDELL RRVKGLAPRV VTLVEQEINT NTAPFASRVG EACGYYGALF  480
ESIELTVSRE KPERVKLDEA LMRKIANSVA CEGRDRVERC EVFGKWRARM SMAGFELKPL  540
SQNVAESMRA GLIYGKRVNP GFTVKEENGG VSFGWMGRTL TVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-169GRAS family protein