PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736663.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 343aa MW: 38167.4 Da PI: 6.1732

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2.1e-15	14	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...........kgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g + R+ k+c++rw +yl XP_022736663.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGainiptsflycLLRCSKSCRLRWTNYL 72 79*******************************************************97 PP
2	Myb_DNA-binding	50.3	5.6e-16	78	123	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022736663.1 78 RGNFTEQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 123 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGAINIP TSFLYCLLRC 60 SKSCRLRWTN YLRPGIKRGN FTEQEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN 120 THLKKKLKKL QTGVDGQNQD GFSSSQSVSK GQWERRLQTD IRMAKQALSE ALSLDKPNSL 180 TDSKDLNLSH PYSRPSQSQA STYASSAENI SRLLQNWMKN PPKPAAHQTN SAETMTQNSF 240 NNTTTAGSIS SEEGALSATT AEGFDSFFSF NSSNSDNVSH ESVSVDQIPN LTPENSVFQD 300 ESKPNLGDQV PLTLIEKWLL DDGSAQAHED LINLSLEDGA ELF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGAINIP TSFLYCLLRC  60
SKSCRLRWTN YLRPGIKRGN FTEQEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN  120
THLKKKLKKL QTGVDGQNQD GFSSSQSVSK GQWERRLQTD IRMAKQALSE ALSLDKPNSL  180
TDSKDLNLSH PYSRPSQSQA STYASSAENI SRLLQNWMKN PPKPAAHQTN SAETMTQNSF  240
NNTTTAGSIS SEEGALSATT AEGFDSFFSF NSSNSDNVSH ESVSVDQIPN LTPENSVFQD  300
ESKPNLGDQV PLTLIEKWLL DDGSAQAHED LINLSLEDGA ELF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74650.1	1e-102	MYB family protein