PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736665.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 259aa    MW: 29174.8 Da    PI: 9.5502
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.11.3e-151472148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...........TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg...........kgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g           + R+ k+c++rw +yl
   XP_022736665.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGainiptsflycLLRCSKSCRLRWTNYL 72
                     79*******************************************************97 PP
2Myb_DNA-binding50.93.6e-1678123148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022736665.1  78 RGNFTEQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 123
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGAINIP TSFLYCLLRC  60
SKSCRLRWTN YLRPGIKRGN FTEQEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN  120
THLKKKLKKL QTGVDGQNQD GFSSSQSVSK GQWERRLQTD IRMAKQALSE ALSLDKPNSL  180
TDSKDLNLSH PYSRPSQSQA STYASSAENI SRLLQNWMKN PPKPAAHQTN SAETMTQNSF  240
NNTTTAGSIS SEEDPQFDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.14e-96MYB family protein