PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736786.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 919aa MW: 101795 Da PI: 8.9807

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.3	6.4e-21	827	907	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li+ r ++++r++ k +++lWeevs+ + ++g++rsp qCk+ w +l ++y++ k ek++ + +pyf++++ XP_022736786.1 827 KWKPEEVKKLIKTRGKLHNRFQVVKGRMALWEEVSASLLAEGISRSPAQCKSLWASLVQKYEESKSEEKSH-----KVWPYFEDMN 907 7******************************************************************97.....46****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MQLGFLGGLS FSYSLYFTSF TPLKAPTKMA ASTAFSLCPY SFSCRPSPRN RYISCSVGSP 60 TPIGTQRTNV PRKNSGRMDG ARKSMEDSVQ RKMEQFYEGT AGPPLRVLPI GGLGEIGMNC 120 MLVGHYDRYI LIDAGVMFPD YDELGVQKII PDTTFIKKWS HKIEAVVITH GHEDHIGALP 180 WVIPALDPNT PIYASSFTIE LIKKRLKENG IFVPSRLKVF KIRKRFMAGP FEIEPLRVTH 240 SIPDCCGLVL RCADGTILHT GDWKIDESPL DGKVFDRQFL KELSKEGVTL MMSDSTNVLS 300 PGRTISERAV ADALLRHISE AKGRIITTQF ASNIHRLGSV KAAADLTGRK LVFVGMSLRT 360 YLDAAWKDGK APIDPSTLVK VEDIDAYAPK DLIIVTTGSQ AEPRAALNLA SYGSSHSFKL 420 NKEDVILYSA KVIPGNESRV MKMLNRISEI GSTIVMGKNE GLHTSGHGYR GELEEVLKIV 480 KPQHFLPIHG ELLFLKEHEL LGKSTGIRHT TVIKNGEMLG VSHLRNRRVL SNGFSSLGKE 540 SLQLMYSDGD KAFGTSAELC IDERLRIASD GIIVVSIEIL RPQKIDGIIE NSLKGKIRIT 600 TRCLWLDKGK LLDALHKAAH AALSSCPVNS PLAHMERTVS EVLRKMVRKY SGKRPEVIAI 660 ALENPAGILS DEINAKLCGN SNVGFGLPTL RKVVDGHPKR RQRNKIKSEE DDINLHLENA 720 SAQNLIGFLR AVGNSEVERL LPEEDTTTSS PDHAERLAPN TEDSDEFWKE FITSSSPVEN 780 LEEDNNGLVP KEEHKPELKS GGTASGGDDS EIPSSQPKSS KPTKRNKWKP EEVKKLIKTR 840 GKLHNRFQVV KGRMALWEEV SASLLAEGIS RSPAQCKSLW ASLVQKYEES KSEEKSHKVW 900 PYFEDMNQVL SDFEATATK

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MQLGFLGGLS FSYSLYFTSF TPLKAPTKMA ASTAFSLCPY SFSCRPSPRN RYISCSVGSP  60
TPIGTQRTNV PRKNSGRMDG ARKSMEDSVQ RKMEQFYEGT AGPPLRVLPI GGLGEIGMNC  120
MLVGHYDRYI LIDAGVMFPD YDELGVQKII PDTTFIKKWS HKIEAVVITH GHEDHIGALP  180
WVIPALDPNT PIYASSFTIE LIKKRLKENG IFVPSRLKVF KIRKRFMAGP FEIEPLRVTH  240
SIPDCCGLVL RCADGTILHT GDWKIDESPL DGKVFDRQFL KELSKEGVTL MMSDSTNVLS  300
PGRTISERAV ADALLRHISE AKGRIITTQF ASNIHRLGSV KAAADLTGRK LVFVGMSLRT  360
YLDAAWKDGK APIDPSTLVK VEDIDAYAPK DLIIVTTGSQ AEPRAALNLA SYGSSHSFKL  420
NKEDVILYSA KVIPGNESRV MKMLNRISEI GSTIVMGKNE GLHTSGHGYR GELEEVLKIV  480
KPQHFLPIHG ELLFLKEHEL LGKSTGIRHT TVIKNGEMLG VSHLRNRRVL SNGFSSLGKE  540
SLQLMYSDGD KAFGTSAELC IDERLRIASD GIIVVSIEIL RPQKIDGIIE NSLKGKIRIT  600
TRCLWLDKGK LLDALHKAAH AALSSCPVNS PLAHMERTVS EVLRKMVRKY SGKRPEVIAI  660
ALENPAGILS DEINAKLCGN SNVGFGLPTL RKVVDGHPKR RQRNKIKSEE DDINLHLENA  720
SAQNLIGFLR AVGNSEVERL LPEEDTTTSS PDHAERLAPN TEDSDEFWKE FITSSSPVEN  780
LEEDNNGLVP KEEHKPELKS GGTASGGDDS EIPSSQPKSS KPTKRNKWKP EEVKKLIKTR  840
GKLHNRFQVV KGRMALWEEV SASLLAEGIS RSPAQCKSLW ASLVQKYEES KSEEKSHKVW  900
PYFEDMNQVL SDFEATATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein