PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736787.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 900aa MW: 99764.5 Da PI: 9.1633

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.3	6.3e-21	808	888	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li+ r ++++r++ k +++lWeevs+ + ++g++rsp qCk+ w +l ++y++ k ek++ + +pyf++++ XP_022736787.1 808 KWKPEEVKKLIKTRGKLHNRFQVVKGRMALWEEVSASLLAEGISRSPAQCKSLWASLVQKYEESKSEEKSH-----KVWPYFEDMN 888 7******************************************************************97.....46****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MQLGFLGGLS FSYSLYFTSF TPLKAPTKMA ASTAFSLCPY SFSCRPSPRN RYISCSVGSP 60 TPIGTQRTNV PRKNSGRMDG ARKSMEDSVQ RKMEQFYEGT AGPPLRVLPI GGLGEIGMNC 120 MLVGHYDRYI LIDAGVMFPD YDELGVQKII PDTTFIKKWS HKIEAVVITH GHEDHIGALP 180 WLIKKRLKEN GIFVPSRLKV FKIRKRFMAG PFEIEPLRVT HSIPDCCGLV LRCADGTILH 240 TGDWKIDESP LDGKVFDRQF LKELSKEGVT LMMSDSTNVL SPGRTISERA VADALLRHIS 300 EAKGRIITTQ FASNIHRLGS VKAAADLTGR KLVFVGMSLR TYLDAAWKDG KAPIDPSTLV 360 KVEDIDAYAP KDLIIVTTGS QAEPRAALNL ASYGSSHSFK LNKEDVILYS AKVIPGNESR 420 VMKMLNRISE IGSTIVMGKN EGLHTSGHGY RGELEEVLKI VKPQHFLPIH GELLFLKEHE 480 LLGKSTGIRH TTVIKNGEML GVSHLRNRRV LSNGFSSLGK ESLQLMYSDG DKAFGTSAEL 540 CIDERLRIAS DGIIVVSIEI LRPQKIDGII ENSLKGKIRI TTRCLWLDKG KLLDALHKAA 600 HAALSSCPVN SPLAHMERTV SEVLRKMVRK YSGKRPEVIA IALENPAGIL SDEINAKLCG 660 NSNVGFGLPT LRKVVDGHPK RRQRNKIKSE EDDINLHLEN ASAQNLIGFL RAVGNSEVER 720 LLPEEDTTTS SPDHAERLAP NTEDSDEFWK EFITSSSPVE NLEEDNNGLV PKEEHKPELK 780 SGGTASGGDD SEIPSSQPKS SKPTKRNKWK PEEVKKLIKT RGKLHNRFQV VKGRMALWEE 840 VSASLLAEGI SRSPAQCKSL WASLVQKYEE SKSEEKSHKV WPYFEDMNQV LSDFEATATK

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MQLGFLGGLS FSYSLYFTSF TPLKAPTKMA ASTAFSLCPY SFSCRPSPRN RYISCSVGSP  60
TPIGTQRTNV PRKNSGRMDG ARKSMEDSVQ RKMEQFYEGT AGPPLRVLPI GGLGEIGMNC  120
MLVGHYDRYI LIDAGVMFPD YDELGVQKII PDTTFIKKWS HKIEAVVITH GHEDHIGALP  180
WLIKKRLKEN GIFVPSRLKV FKIRKRFMAG PFEIEPLRVT HSIPDCCGLV LRCADGTILH  240
TGDWKIDESP LDGKVFDRQF LKELSKEGVT LMMSDSTNVL SPGRTISERA VADALLRHIS  300
EAKGRIITTQ FASNIHRLGS VKAAADLTGR KLVFVGMSLR TYLDAAWKDG KAPIDPSTLV  360
KVEDIDAYAP KDLIIVTTGS QAEPRAALNL ASYGSSHSFK LNKEDVILYS AKVIPGNESR  420
VMKMLNRISE IGSTIVMGKN EGLHTSGHGY RGELEEVLKI VKPQHFLPIH GELLFLKEHE  480
LLGKSTGIRH TTVIKNGEML GVSHLRNRRV LSNGFSSLGK ESLQLMYSDG DKAFGTSAEL  540
CIDERLRIAS DGIIVVSIEI LRPQKIDGII ENSLKGKIRI TTRCLWLDKG KLLDALHKAA  600
HAALSSCPVN SPLAHMERTV SEVLRKMVRK YSGKRPEVIA IALENPAGIL SDEINAKLCG  660
NSNVGFGLPT LRKVVDGHPK RRQRNKIKSE EDDINLHLEN ASAQNLIGFL RAVGNSEVER  720
LLPEEDTTTS SPDHAERLAP NTEDSDEFWK EFITSSSPVE NLEEDNNGLV PKEEHKPELK  780
SGGTASGGDD SEIPSSQPKS SKPTKRNKWK PEEVKKLIKT RGKLHNRFQV VKGRMALWEE  840
VSASLLAEGI SRSPAQCKSL WASLVQKYEE SKSEEKSHKV WPYFEDMNQV LSDFEATATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein