PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736788.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 796aa MW: 88579.1 Da PI: 9.0471

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.6	5.3e-21	704	784	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li+ r ++++r++ k +++lWeevs+ + ++g++rsp qCk+ w +l ++y++ k ek++ + +pyf++++ XP_022736788.1 704 KWKPEEVKKLIKTRGKLHNRFQVVKGRMALWEEVSASLLAEGISRSPAQCKSLWASLVQKYEESKSEEKSH-----KVWPYFEDMN 784 7******************************************************************97.....46****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MYDMLKKPIL VPQAAYALRL PCLTGVPWLF FMRKELFLEL YHLLLYGVVK DSIIFVHSVI 60 PALDPNTPIY ASSFTIELIK KRLKENGIFV PSRLKVFKIR KRFMAGPFEI EPLRVTHSIP 120 DCCGLVLRCA DGTILHTGDW KIDESPLDGK VFDRQFLKEL SKEGVTLMMS DSTNVLSPGR 180 TISERAVADA LLRHISEAKG RIITTQFASN IHRLGSVKAA ADLTGRKLVF VGMSLRTYLD 240 AAWKDGKAPI DPSTLVKVED IDAYAPKDLI IVTTGSQAEP RAALNLASYG SSHSFKLNKE 300 DVILYSAKVI PGNESRVMKM LNRISEIGST IVMGKNEGLH TSGHGYRGEL EEVLKIVKPQ 360 HFLPIHGELL FLKEHELLGK STGIRHTTVI KNGEMLGVSH LRNRRVLSNG FSSLGKESLQ 420 LMYSDGDKAF GTSAELCIDE RLRIASDGII VVSIEILRPQ KIDGIIENSL KGKIRITTRC 480 LWLDKGKLLD ALHKAAHAAL SSCPVNSPLA HMERTVSEVL RKMVRKYSGK RPEVIAIALE 540 NPAGILSDEI NAKLCGNSNV GFGLPTLRKV VDGHPKRRQR NKIKSEEDDI NLHLENASAQ 600 NLIGFLRAVG NSEVERLLPE EDTTTSSPDH AERLAPNTED SDEFWKEFIT SSSPVENLEE 660 DNNGLVPKEE HKPELKSGGT ASGGDDSEIP SSQPKSSKPT KRNKWKPEEV KKLIKTRGKL 720 HNRFQVVKGR MALWEEVSAS LLAEGISRSP AQCKSLWASL VQKYEESKSE EKSHKVWPYF 780 EDMNQVLSDF EATATK

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MYDMLKKPIL VPQAAYALRL PCLTGVPWLF FMRKELFLEL YHLLLYGVVK DSIIFVHSVI  60
PALDPNTPIY ASSFTIELIK KRLKENGIFV PSRLKVFKIR KRFMAGPFEI EPLRVTHSIP  120
DCCGLVLRCA DGTILHTGDW KIDESPLDGK VFDRQFLKEL SKEGVTLMMS DSTNVLSPGR  180
TISERAVADA LLRHISEAKG RIITTQFASN IHRLGSVKAA ADLTGRKLVF VGMSLRTYLD  240
AAWKDGKAPI DPSTLVKVED IDAYAPKDLI IVTTGSQAEP RAALNLASYG SSHSFKLNKE  300
DVILYSAKVI PGNESRVMKM LNRISEIGST IVMGKNEGLH TSGHGYRGEL EEVLKIVKPQ  360
HFLPIHGELL FLKEHELLGK STGIRHTTVI KNGEMLGVSH LRNRRVLSNG FSSLGKESLQ  420
LMYSDGDKAF GTSAELCIDE RLRIASDGII VVSIEILRPQ KIDGIIENSL KGKIRITTRC  480
LWLDKGKLLD ALHKAAHAAL SSCPVNSPLA HMERTVSEVL RKMVRKYSGK RPEVIAIALE  540
NPAGILSDEI NAKLCGNSNV GFGLPTLRKV VDGHPKRRQR NKIKSEEDDI NLHLENASAQ  600
NLIGFLRAVG NSEVERLLPE EDTTTSSPDH AERLAPNTED SDEFWKEFIT SSSPVENLEE  660
DNNGLVPKEE HKPELKSGGT ASGGDDSEIP SSQPKSSKPT KRNKWKPEEV KKLIKTRGKL  720
HNRFQVVKGR MALWEEVSAS LLAEGISRSP AQCKSLWASL VQKYEESKSE EKSHKVWPYF  780
EDMNQVLSDF EATATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein