PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736789.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 745aa MW: 82543.8 Da PI: 9.066

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.7	4.9e-21	653	733	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li+ r ++++r++ k +++lWeevs+ + ++g++rsp qCk+ w +l ++y++ k ek++ + +pyf++++ XP_022736789.1 653 KWKPEEVKKLIKTRGKLHNRFQVVKGRMALWEEVSASLLAEGISRSPAQCKSLWASLVQKYEESKSEEKSH-----KVWPYFEDMN 733 7******************************************************************97.....46****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MAMKITLVIP ALDPNTPIYA SSFTIELIKK RLKENGIFVP SRLKVFKIRK RFMAGPFEIE 60 PLRVTHSIPD CCGLVLRCAD GTILHTGDWK IDESPLDGKV FDRQFLKELS KEGVTLMMSD 120 STNVLSPGRT ISERAVADAL LRHISEAKGR IITTQFASNI HRLGSVKAAA DLTGRKLVFV 180 GMSLRTYLDA AWKDGKAPID PSTLVKVEDI DAYAPKDLII VTTGSQAEPR AALNLASYGS 240 SHSFKLNKED VILYSAKVIP GNESRVMKML NRISEIGSTI VMGKNEGLHT SGHGYRGELE 300 EVLKIVKPQH FLPIHGELLF LKEHELLGKS TGIRHTTVIK NGEMLGVSHL RNRRVLSNGF 360 SSLGKESLQL MYSDGDKAFG TSAELCIDER LRIASDGIIV VSIEILRPQK IDGIIENSLK 420 GKIRITTRCL WLDKGKLLDA LHKAAHAALS SCPVNSPLAH MERTVSEVLR KMVRKYSGKR 480 PEVIAIALEN PAGILSDEIN AKLCGNSNVG FGLPTLRKVV DGHPKRRQRN KIKSEEDDIN 540 LHLENASAQN LIGFLRAVGN SEVERLLPEE DTTTSSPDHA ERLAPNTEDS DEFWKEFITS 600 SSPVENLEED NNGLVPKEEH KPELKSGGTA SGGDDSEIPS SQPKSSKPTK RNKWKPEEVK 660 KLIKTRGKLH NRFQVVKGRM ALWEEVSASL LAEGISRSPA QCKSLWASLV QKYEESKSEE 720 KSHKVWPYFE DMNQVLSDFE ATATK

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MAMKITLVIP ALDPNTPIYA SSFTIELIKK RLKENGIFVP SRLKVFKIRK RFMAGPFEIE  60
PLRVTHSIPD CCGLVLRCAD GTILHTGDWK IDESPLDGKV FDRQFLKELS KEGVTLMMSD  120
STNVLSPGRT ISERAVADAL LRHISEAKGR IITTQFASNI HRLGSVKAAA DLTGRKLVFV  180
GMSLRTYLDA AWKDGKAPID PSTLVKVEDI DAYAPKDLII VTTGSQAEPR AALNLASYGS  240
SHSFKLNKED VILYSAKVIP GNESRVMKML NRISEIGSTI VMGKNEGLHT SGHGYRGELE  300
EVLKIVKPQH FLPIHGELLF LKEHELLGKS TGIRHTTVIK NGEMLGVSHL RNRRVLSNGF  360
SSLGKESLQL MYSDGDKAFG TSAELCIDER LRIASDGIIV VSIEILRPQK IDGIIENSLK  420
GKIRITTRCL WLDKGKLLDA LHKAAHAALS SCPVNSPLAH MERTVSEVLR KMVRKYSGKR  480
PEVIAIALEN PAGILSDEIN AKLCGNSNVG FGLPTLRKVV DGHPKRRQRN KIKSEEDDIN  540
LHLENASAQN LIGFLRAVGN SEVERLLPEE DTTTSSPDHA ERLAPNTEDS DEFWKEFITS  600
SSPVENLEED NNGLVPKEEH KPELKSGGTA SGGDDSEIPS SQPKSSKPTK RNKWKPEEVK  660
KLIKTRGKLH NRFQVVKGRM ALWEEVSASL LAEGISRSPA QCKSLWASLV QKYEESKSEE  720
KSHKVWPYFE DMNQVLSDFE ATATK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein