PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736840.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LFY
Protein Properties Length: 397aa    MW: 44031.7 Da    PI: 7.088
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY637.12.6e-19413831386
         FLO_LFY   1 mdpeafsas.lfkwdpraaaaapparlleeaavseapleaaaaaaarklr...........eleelfkayGvryltvakiaelGftvstLvdmkd 83 
                     mdpeaf++  +fkwdpr ++a+ parl+e  a ++++ ++aaaaaa ++            ++eelf+ayG+ry+t+akiaelGftvstL++mk+
  XP_022736840.1   1 MDPEAFATGsFFKWDPRGVMAPMPARLMEAVASPQPH-TTAAAAAAAAVAaaymgrprelgGIEELFQAYGIRYYTAAKIAELGFTVSTLLGMKE 94 
                     9****876549*********99999998777655554.33333333222234566788999********************************** PP

         FLO_LFY  84 eelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaee 178
                     eeld++m+s+s+ifr++llvGeryG+kaavraerrrleee+  ++rr+l+s d+++aldalsqeglseepvq+ekeaagsgg+g  ++++v+a  
  XP_022736840.1  95 EELDEMMNSVSQIFRWELLVGERYGVKAAVRAERRRLEEED--SRRRHLVSGDTTNALDALSQEGLSEEPVQQEKEAAGSGGGG--AWDVVVAGG 185
                     ***************************************88..99999********************************9999..999999883 PP

         FLO_LFY 179 kkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiaker 273
                           +kk+   + +rk +k+++ e  +++  e  +d+e++  +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iaker
  XP_022736840.1 186 ------RKKQ---R-RRKGQKKVVVEVGHEDGLEGGDDDENGDGEGYERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKER 270
                     ......3333...2.22333333333444444444455555555699************************************************ PP

         FLO_LFY 274 GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
                     GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplva+aa+qgwdida+fnahprL iW
  XP_022736840.1 271 GEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVALAASQGWDIDAIFNAHPRLVIW 365
                     *********************************************************************************************** PP

         FLO_LFY 369 YvPtkLrqLChlerskas 386
                     YvPtkLrqLCh+er++a+
  XP_022736840.1 366 YVPTKLRQLCHAERNSAA 383
                     **************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MDPEAFATGS FFKWDPRGVM APMPARLMEA VASPQPHTTA AAAAAAAVAA AYMGRPRELG  60
GIEELFQAYG IRYYTAAKIA ELGFTVSTLL GMKEEELDEM MNSVSQIFRW ELLVGERYGV  120
KAAVRAERRR LEEEDSRRRH LVSGDTTNAL DALSQEGLSE EPVQQEKEAA GSGGGGAWDV  180
VVAGGRKKQR RRKGQKKVVV EVGHEDGLEG GDDDENGDGE GYERQREHPF IVTEPGEVAR  240
GKKNGLDYLF HLYEQCREFL IQVQNIAKER GEKCPTKVTN QVFRYAKKAG ASYINKPKMR  300
HYVHCYALHC LDEEASNALR RAFKERGENV GAWRQACYKP LVALAASQGW DIDAIFNAHP  360
RLVIWYVPTK LRQLCHAERN SAAACSSVSG GPDHIAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186192RKKQRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-109LFY family protein