PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736948.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 263aa MW: 29434 Da PI: 4.8532

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l++ G +W+++++ g++R++k+c++rw +yl XP_022736948.1 14 RGPWTAEEDKKLINFLLTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_022736948.1 70 LSEAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 5899*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MGRQPCCDKL GVKRGPWTAE EDKKLINFLL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL SEAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPLN KELAKAEEIS SHANNSADNH ITENDGIANS SEDNSSTQTE NCSSTDDSNL 180 IDSICNDDSL LTSLWMDEPA PLVDASWNGI PAEETCNGTS LPSWEENCAW LLDCQDFGIH 240 DFGFDCINDI ELNSLEMGNK TVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	1e-110	MYB family protein