PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736961.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 342aa MW: 38255 Da PI: 7.2919

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	1e-09	172	219	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq XP_022736961.1 172 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 219 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAAFSFQPHR FLLDSIFLPN TPTKVSGFME EGNIRSNCFS QFYPPEPVLE SPLDPKFHES 60 SCLDHSSKVA HSDNEPSVTK KQSTDDSTVV DKLESGEQVT QNVTLTDRKR RTRNGTTLNS 120 AQHKDAKEGK TKKQKKCNDA PENEKKDQKK APQEPPTGYI HVRARRGQAT DSHSLAERVR 180 REKISERMKT LQRLVPGCDK VTGKALMLDE IINYVQSLQN QVEFLSMKLA SVNPMFYDFG 240 VDLEALMVGP ETVNRVASPL PSLQQCNPTH PAAFVDITTA TFAPAHNYPL LDASAALLLQ 300 QGQRPNVFSQ PQDNGSLLWD VEDQRQKFLS STGLNDNLCS FH

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAAFSFQPHR FLLDSIFLPN TPTKVSGFME EGNIRSNCFS QFYPPEPVLE SPLDPKFHES  60
SCLDHSSKVA HSDNEPSVTK KQSTDDSTVV DKLESGEQVT QNVTLTDRKR RTRNGTTLNS  120
AQHKDAKEGK TKKQKKCNDA PENEKKDQKK APQEPPTGYI HVRARRGQAT DSHSLAERVR  180
REKISERMKT LQRLVPGCDK VTGKALMLDE IINYVQSLQN QVEFLSMKLA SVNPMFYDFG  240
VDLEALMVGP ETVNRVASPL PSLQQCNPTH PAAFVDITTA TFAPAHNYPL LDASAALLLQ  300
QGQRPNVFSQ PQDNGSLLWD VEDQRQKFLS STGLNDNLCS FH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	135	RKRRTRNGTTLNSAQHKDAKEGKTKKQK
2	108	149	RKRRTRNGTTLNSAQHKDAKEGKTKKQKKCNDAPENEKKDQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-62	bHLH family protein