PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736999.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 190aa MW: 22213.2 Da PI: 9.4085

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.9e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l++++ +G ++WktIa + g++R++k+c++rw++yl XP_022736999.1 15 KGSWTAEEDRKLAEYIGIHGAKRWKTIAIKAGLNRCGKSCRLRWLNYL 62 799*******************************************97 PP
2	Myb_DNA-binding	54.4	2.8e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022736999.1 68 RGNITDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MAPKKDGVSK RVMNKGSWTA EEDRKLAEYI GIHGAKRWKT IAIKAGLNRC GKSCRLRWLN 60 YLRPNIKRGN ITDEEEDLIL RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLIKKINQK 120 EKTKQTSTSE QTVPQKTWET VRMEEEVAKG SDDNFELSFD VNDFFDFSSQ GCFGLEWVNK 180 FLELDNYEDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-53	MYB family protein