PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737001.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 795aa    MW: 87512.1 Da    PI: 6.1799
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.69.2e-1034347943374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     elL+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ ++  pp++ s+ ++  ++ a+k+f evsP+++f ++t
  XP_022737001.1 434 ELLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLM--NNPVSPPPPRSPSPFDVFFKMGAYKVFAEVSPLIQFVNFT 526
                     79*************************************************98..6666778888888899************************ PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..e 190
                     +Nqa+lea++g++r+Hi+Dfdi+ G+QW++++q+L  R++g+pslRiT+++sp++++  el  ++e+L +fA+e+gv+fe +vl  ++l++   +
  XP_022737001.1 527 CNQALLEALDGADRIHIVDFDIGFGAQWASFMQELPMRSRGAPSLRITAFASPSAQHPIELGLMRENLMQFANEIGVSFELEVLNFDSLDQTpyS 621
                     ************************************************************************************99999887557 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l ++r +++Ea+aVn+ +   +  +++ +l++    +L++vk+lsPk+vv  ++ +d+n+ +F++++++a++ y  l++sl+a    +s++ +k+
  XP_022737001.1 622 LPMFRSNENEAVAVNFPV--WSSSNQPSALPN----LLHFVKQLSPKIVVSLDRGCDRNDLPFAQHIIHAFQSYINLLESLDAI-NVTSDAVNKI 709
                     78889999********99..444455666666....*********************************************887.689******* PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er+ll ++i+++v  +  +     e++  W+  ++ aGF p+++s+++++qa++l+++ +++g++ve+++ slvl+W++r L+s+SaWr
  XP_022737001.1 710 ERFLLVPRIESAVLGRLHA----PERMPLWKTLFSLAGFAPITFSNFTETQAECLVKRAQVRGFHVEKRQTSLVLCWQQRDLISASAWR 794
                     *************998887....999**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MHFQLQAKGA VEIVGFGSIC QQDKWIKQQE ANSFSFANSF HYNNEQEPTS VLHMRRSQSP  60
PTSASTLSSS FNGGATGAAG RGNSTDNTTT TAATIAPPET QLPNNNKEEW ASELQLIPSE  120
LDLVPGPGAV QRCNLGLEDW ETMLSESAVS PSQDHSLLRW IAGDVDDHSF GLKQLLQTGS  180
SGPSQGLEFE GNAGLGVIDQ GPGFDPIGSL VSSGPVNVIS SAAHNLGGFP GSGFMPNANN  240
NGNGKIGSVM PSCSSVAVVN NHKVLGPTVG FNTNIQNPMF TSPAENIGHP VSLPLLYQQQ  300
QQGQYLESQE EKPQILNPQI LMGQLHHPQN PNFFLPLPQE QQFLQPLPKR LNPGNLELSS  360
PIPKLPFSDA GHDLFMRKQQ QQLMGFPHGV PFVPQQKPLM VAKQKVSSPE EEMAQQQQQH  420
QYQLHQQQQA TLFELLYKAA ELVGTGNFSH AQGILARLNH QLSPVGKPLQ RAAFYFKEAL  480
QLLLLMNNPV SPPPPRSPSP FDVFFKMGAY KVFAEVSPLI QFVNFTCNQA LLEALDGADR  540
IHIVDFDIGF GAQWASFMQE LPMRSRGAPS LRITAFASPS AQHPIELGLM RENLMQFANE  600
IGVSFELEVL NFDSLDQTPY SLPMFRSNEN EAVAVNFPVW SSSNQPSALP NLLHFVKQLS  660
PKIVVSLDRG CDRNDLPFAQ HIIHAFQSYI NLLESLDAIN VTSDAVNKIE RFLLVPRIES  720
AVLGRLHAPE RMPLWKTLFS LAGFAPITFS NFTETQAECL VKRAQVRGFH VEKRQTSLVL  780
CWQQRDLISA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-118GRAS family protein