PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737049.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 201aa MW: 23540.1 Da PI: 10.8345

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.1	1.3e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskRrng+lKKA+ELS+LCdaeva++ifss+gkly ++s XP_022737049.1 9 KRIENPTNRQVTFSKRRNGLLKKAFELSILCDAEVALLIFSSSGKLYQFAS 59 79***********************************************86 PP
2	K-box	68.5	2.3e-23	84	172	12	100
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++e ++ e++ Lk+ i+ L+ ++hl Ged+ L ++eL+qLe+qL+ +++++Rs+K +++ ++ l+++ k+lqeen++L+k+l+e XP_022737049.1 84 RTMEFWRSEIEELKRSINALEARLKHLSGEDILALGMRELKQLERQLKIGVERVRSRKRRIVSDHATSLKRRHKQLQEENTRLQKRLNE 172 56899*******************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MGRGKVELKR IENPTNRQVT FSKRRNGLLK KAFELSILCD AEVALLIFSS SGKLYQFASH 60 DMDRSITKYR REVGLPDSNN PQFRTMEFWR SEIEELKRSI NALEARLKHL SGEDILALGM 120 RELKQLERQL KIGVERVRSR KRRIVSDHAT SLKRRHKQLQ EENTRLQKRL NELQDGNISS 180 RIVGENACTM FHEQRILQDL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	3e-49	MIKC_MADS family protein